RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 NT5C2P49902 561 aa18.81■□□□□ 0.6
CSNK1D-212ENST00000580061 FSTL1Q12841 308 aa18.81■□□□□ 0.6
CSNK1D-212ENST00000580061 TRDNQ13061 729 aa18.81■□□□□ 0.6
CSNK1D-212ENST00000580061 MAP3K11Q16584 847 aa18.81■□□□□ 0.6
CSNK1D-212ENST00000580061 NCOA7Q8NI08 942 aa18.81■□□□□ 0.6
CSNK1D-212ENST00000580061 CCDC17Q96LX7 622 aa18.81■□□□□ 0.6
CSNK1D-212ENST00000580061 CELF2O95319 508 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 AKR1B1P15121 316 aa18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 CAP2P40123 477 aa18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 ESR2Q92731 530 aa18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 WRNIP1Q96S55 665 aa18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 ANGEL1Q9UNK9 670 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-212ENST00000580061 RANBP6O60518 1105 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 KDM4AO75164 1064 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 GDF11O95390 407 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 INPP5BP32019 993 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 FKBP1BP68106 108 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 TFAP4Q01664 338 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 COL9A3Q14050 684 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 TTLL12Q14166 644 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 FAM47AQ5JRC9 791 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 CST9Q5W186 159 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 MOB2Q70IA6 237 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 MB21D2Q8IYB1 491 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 JAKMIP1Q96N16 626 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 GBA2Q9HCG7 927 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 ZSWIM5Q9P217 1185 aa18.79■□□□□ 0.6
CSNK1D-212ENST00000580061 TSPY2A6NKD2 308 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 CTNND1O60716 968 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 PSMA5P28066 241 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 IREB2P48200 963 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 JAG1P78504 1218 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 ABCB5Q2M3G0 1257 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 ARMC9Q7Z3E5 817 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 NEDD1Q8NHV4 660 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 KIF2CQ99661 725 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 TM6SF1Q9BZW5 370 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 PLIN4Q96Q06 1357 aa18.78■□□□□ 0.6
CSNK1D-212ENST00000580061 PHIPQ8WWQ0 1821 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 TSPY3P0CV98 308 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 TSPY8P0CW00 308 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 MAP3K9P80192 1104 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 C2orf69Q8N8R5 385 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 ZKSCAN4Q969J2 545 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 GINM1Q9NU53 330 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 ZBTB21Q9ULJ3 1066 aa18.77■□□□□ 0.6
CSNK1D-212ENST00000580061 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 GH2P01242 217 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 ASNSP08243 561 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 HMGB1P09429 215 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 MCM5P33992 734 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 LDLRAD1Q5T700 205 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 ANKRD13AQ8IZ07 590 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 SCYL3Q8IZE3 742 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 CABP5Q9NP86 173 aa18.76■□□□□ 0.59
CSNK1D-212ENST00000580061 IGKV6D-41A0A0C4DH26 115 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 UBE2Q2LH0YL09 131 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 GUCY1A2P33402 732 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 ANTXR2P58335 489 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 EXOSC10Q01780 885 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 VGLL4Q14135 290 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 DHX32Q7L7V1 743 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 CHST3Q7LGC8 479 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 IL17RBQ9NRM6 502 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 TCP11L1Q9NUJ3 509 aa18.75■□□□□ 0.59
CSNK1D-212ENST00000580061 UNCXA6NJT0 531 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 PRC1O43663 620 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 CPA1P15085 419 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 SEPT2Q15019 361 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 IQCA1Q86XH1 822 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 CSADQ9Y600 493 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 CYP46A1Q9Y6A2 500 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 SNCAIPQ9Y6H5 919 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 WDR19Q8NEZ3 1342 aa18.74■□□□□ 0.59
CSNK1D-212ENST00000580061 NMT2O60551 498 aa18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 RAB3GAP1Q15042 981 aa18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 CLMNQ96JQ2 1002 aa18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 ZSCAN10Q96SZ4 725 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 MTA3Q9BTC8 594 aa18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-212ENST00000580061 NOVP48745 357 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 CLEC10AQ8IUN9 316 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms