RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 PCDHGB2Q9Y5G2 931 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 GLULP15104 373 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 USP46P62068 366 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 ODF1Q14990 250 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 PPP2R5BQ15173 497 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 ZYXQ15942 572 aaKnown RBP6.12□□□□□ -1.43
BRIP1-202ENST00000577598 NUTM2GQ5VZR2 741 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 BICDL1Q6ZP65 573 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 PPFIBP1Q86W92 1011 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 RPAP2Q8IXW5 612 aaPredicted RBP6.12□□□□□ -1.43
BRIP1-202ENST00000577598 FOXJ1Q92949 421 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 CCDC138Q96M89 665 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 KATNAL1Q9BW62 490 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 BRMS1Q9HCU9 246 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 KRT84Q9NSB2 600 aa6.12□□□□□ -1.43
BRIP1-202ENST00000577598 PABPN1LA6NDY0 278 aaKnown RBP6.11□□□□□ -1.43
BRIP1-202ENST00000577598 PHKA2P46019 1235 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 ARSJQ5FYB0 599 aaPredicted RBP6.11□□□□□ -1.43
BRIP1-202ENST00000577598 GOLGA6L1Q8N7Z2 621 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 PJA1Q8NG27 643 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 C14orf119Q9NWQ9 140 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 EREGO14944 169 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 CTNND1O60716 968 aaKnown RBP6.11□□□□□ -1.43
BRIP1-202ENST00000577598 KRT9P35527 623 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 IFNL2Q8IZJ0 200 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 NELL2Q99435 816 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 EHD4Q9H223 541 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 VPS11Q9H270 941 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 PCDHGA4Q9Y5G9 962 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 FGFR1P11362 822 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 ACPPP15309 386 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 C2orf27AQ580R0 203 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 KIAA1958Q8N8K9 716 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 UHMK1Q8TAS1 419 aaKnown RBP6.11□□□□□ -1.43
BRIP1-202ENST00000577598 IFT122Q9HBG6 1241 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 TMEM260Q9NX78 707 aa6.11□□□□□ -1.43
BRIP1-202ENST00000577598 KCNK3O14649 394 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CD4P01730 458 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CCDC38Q502W7 563 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 KLHDC7AQ5VTJ3 777 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 PPP4R3AQ6IN85 833 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 RIN2Q8WYP3 895 aaPredicted RBP6.1□□□□□ -1.43
BRIP1-202ENST00000577598 KIAA1191Q96A73 305 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 ARMC5Q96C12 935 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CERS4Q9HA82 394 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CASS4Q9NQ75 786 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CEP83Q9Y592 693 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 F13A1P00488 732 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 SOD2P04179 222 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 SRGAP2CP0DJJ0 459 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 SETSIPP0DME0 302 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 ITGAEP38570 1179 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 SH3BGRP55822 239 aaPredicted RBP6.1□□□□□ -1.43
BRIP1-202ENST00000577598 TAF11Q15544 211 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 MAPRE1Q15691 268 aaKnown RBP6.1□□□□□ -1.43
BRIP1-202ENST00000577598 FXNQ16595 210 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 NFATC2IPQ8NCF5 419 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 SUPT16HQ9Y5B9 1047 aaKnown RBP6.1□□□□□ -1.43
BRIP1-202ENST00000577598 PCDHB5Q9Y5E4 795 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 A0A087X0B3 334 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 FGAP02671 866 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 TLR1Q15399 786 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 MAP7D1Q3KQU3 841 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 CFAP100Q494V2 611 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 MAP3K21Q5TCX8 1036 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 C1orf53Q5VUE5 145 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 LVRNQ6Q4G3 990 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 ZZZ3Q8IYH5 903 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 RIN3Q8TB24 985 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 RILPL2Q969X0 211 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 KLRG1Q96E93 195 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 ZMAT2Q96NC0 199 aaKnown RBP6.1□□□□□ -1.43
BRIP1-202ENST00000577598 YME1L1Q96TA2 773 aa6.1□□□□□ -1.43
BRIP1-202ENST00000577598 THG1LQ9NWX6 298 aaKnown RBP6.1□□□□□ -1.43
BRIP1-202ENST00000577598 EIF3FO00303 357 aaPredicted RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 KIF3CO14782 793 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 ACTN2P35609 894 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 TNNT3P45378 269 aaPredicted RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 AP1B1Q10567 949 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 MPRIPQ6WCQ1 1025 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 FGD2Q7Z6J4 655 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 TTC1Q99614 292 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 OCSTAMPQ9BR26 566 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 ARHGAP26Q9UNA1 814 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 TTLL3Q9Y4R7 772 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 AP3D1O14617 1153 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 FGFR4P22455 802 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 EFR3AQ14156 821 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 KRT32Q14532 448 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 CCDC170Q8IYT3 715 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 ALDH16A1Q8IZ83 802 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 PCSK9Q8NBP7 692 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 SH3KBP1Q96B97 665 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 SHDQ96IW2 340 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 USB1Q9BQ65 265 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 OXCT2Q9BYC2 517 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms