RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 ERO1AQ96HE7 468 aa31.78■■■□□ 2.68
PPP4R1-204ENST00000577393 PTPRFP10586 1907 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 PDE1AP54750 535 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 CD99L2Q8TCZ2 262 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 APPBP2Q92624 585 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 OSBP2Q969R2 916 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 AS3MTQ9HBK9 375 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 ZBTB21Q9ULJ3 1066 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 SLC4A4Q9Y6R1 1079 aa31.77■■■□□ 2.68
PPP4R1-204ENST00000577393 CYP2D6P10635 497 aa31.76■■■□□ 2.67
PPP4R1-204ENST00000577393 GABPAQ06546 454 aa31.76■■■□□ 2.67
PPP4R1-204ENST00000577393 PKN2Q16513 984 aaKnown RBP31.76■■■□□ 2.67
PPP4R1-204ENST00000577393 STRBPQ96SI9 672 aaKnown RBP31.76■■■□□ 2.67
PPP4R1-204ENST00000577393 WDR18Q9BV38 432 aa31.76■■■□□ 2.67
PPP4R1-204ENST00000577393 SHMT1P34896 483 aa31.75■■■□□ 2.67
PPP4R1-204ENST00000577393 LRRFIP1Q32MZ4 808 aaKnown RBP31.75■■■□□ 2.67
PPP4R1-204ENST00000577393 FSD1Q9BTV5 496 aa31.75■■■□□ 2.67
PPP4R1-204ENST00000577393 GH2P01242 217 aa31.74■■■□□ 2.67
PPP4R1-204ENST00000577393 CERKLQ49MI3 558 aaPredicted RBP31.74■■■□□ 2.67
PPP4R1-204ENST00000577393 PARK7Q99497 189 aaKnown RBP31.74■■■□□ 2.67
PPP4R1-204ENST00000577393 NUCB1Q02818 461 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 C17orf99Q6UX52 265 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 CHD1LQ86WJ1 897 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 DDRGK1Q96HY6 314 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 CPA4Q9UI42 421 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 SLC45A1Q9Y2W3 748 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 TRIM17Q9Y577 477 aa31.73■■■□□ 2.67
PPP4R1-204ENST00000577393 CYP2C8P10632 490 aa31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 HMGCS2P54868 508 aa31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 CAP1Q01518 475 aa31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 OTOP1Q7RTM1 612 aa31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 PROCA1Q8NCQ7 364 aaPredicted RBP31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 AGTPBP1Q9UPW5 1226 aa31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 BAZ2AQ9UIF9 1905 aaKnown RBP31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 ADGRA2Q96PE1 1338 aa31.72■■■□□ 2.67
PPP4R1-204ENST00000577393 CCDC85CA6NKD9 419 aa31.71■■■□□ 2.67
PPP4R1-204ENST00000577393 USP17L12C9JPN9 530 aa31.71■■■□□ 2.67
PPP4R1-204ENST00000577393 USP17L21D6R901 530 aa31.71■■■□□ 2.67
PPP4R1-204ENST00000577393 SH3D19Q5HYK7 790 aa31.71■■■□□ 2.67
PPP4R1-204ENST00000577393 TREML2Q5T2D2 321 aa31.71■■■□□ 2.67
PPP4R1-204ENST00000577393 CYP2D7A0A087X1C5 515 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 M0R2C6 588 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 BACE1P56817 501 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 MTMR2Q13614 643 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 ABCB5Q2M3G0 1257 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 C12orf60Q5U649 245 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 DYNLL2Q96FJ2 89 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 EFCC1Q9HA90 598 aa31.7■■■□□ 2.67
PPP4R1-204ENST00000577393 GPAA1O43292 621 aa31.69■■■□□ 2.66
PPP4R1-204ENST00000577393 FBXO46Q6PJ61 603 aaPredicted RBP31.69■■■□□ 2.66
PPP4R1-204ENST00000577393 AMOTL1Q8IY63 956 aa31.69■■■□□ 2.66
PPP4R1-204ENST00000577393 SLC44A5Q8NCS7 719 aa31.69■■■□□ 2.66
PPP4R1-204ENST00000577393 EVI5LQ96CN4 794 aa31.69■■■□□ 2.66
PPP4R1-204ENST00000577393 GSG1L2A8MUP6 293 aa31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 USP17L10C9JJH3 530 aa31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 SMIM22K7EJ46 135 aa31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 CTR9Q6PD62 1173 aa31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 SEC62Q99442 399 aaKnown RBP31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 CABP5Q9NP86 173 aa31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 SWAP70Q9UH65 585 aa31.68■■■□□ 2.66
PPP4R1-204ENST00000577393 C19orf81C9J6K1 198 aa31.67■■■□□ 2.66
PPP4R1-204ENST00000577393 LACTBP83111 547 aaPredicted RBP31.67■■■□□ 2.66
PPP4R1-204ENST00000577393 RAB3GAP1Q15042 981 aa31.67■■■□□ 2.66
PPP4R1-204ENST00000577393 ZMYM1Q5SVZ6 1142 aa31.67■■■□□ 2.66
PPP4R1-204ENST00000577393 TAOK2Q9UL54 1235 aa31.67■■■□□ 2.66
PPP4R1-204ENST00000577393 HPS5Q9UPZ3 1129 aa31.67■■■□□ 2.66
PPP4R1-204ENST00000577393 TMOD4Q9NZQ9 345 aa31.66■■■□□ 2.66
PPP4R1-204ENST00000577393 LOC285556D6RIA3 1793 aa31.66■■■□□ 2.66
PPP4R1-204ENST00000577393 GNAT2P19087 354 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 GUCY1A2P33402 732 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 KIF22Q14807 665 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 ARHGEF6Q15052 776 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 GIMAP6Q6P9H5 292 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 PLEKHM2Q8IWE5 1019 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 ARHGAP39Q9C0H5 1083 aa31.65■■■□□ 2.66
PPP4R1-204ENST00000577393 BCRP11274 1271 aa31.64■■■□□ 2.66
PPP4R1-204ENST00000577393 ARPP21Q9UBL0 812 aaPredicted RBP31.64■■■□□ 2.66
PPP4R1-204ENST00000577393 PNMA3Q9UL41 463 aa31.64■■■□□ 2.66
PPP4R1-204ENST00000577393 MPHOSPH10O00566 681 aaKnown RBP31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 CDK8P49336 464 aa31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 PABPC4Q13310 644 aaKnown RBP eCLIP31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 SEPT2Q15019 361 aa31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 SBK1Q52WX2 424 aa31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 C16orf86Q6ZW13 317 aa31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 SMCR8Q8TEV9 937 aaPredicted RBP31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 PTPN22Q9Y2R2 807 aa31.63■■■□□ 2.65
PPP4R1-204ENST00000577393 PATL2C9JE40 543 aaKnown RBP31.62■■■□□ 2.65
PPP4R1-204ENST00000577393 ECM2O94769 699 aaPredicted RBP31.62■■■□□ 2.65
PPP4R1-204ENST00000577393 OSBPL3Q9H4L5 887 aa31.62■■■□□ 2.65
PPP4R1-204ENST00000577393 EPB41L4AQ9HCS5 686 aaPredicted RBP31.62■■■□□ 2.65
PPP4R1-204ENST00000577393 EMILIN3Q9NT22 766 aa31.62■■■□□ 2.65
PPP4R1-204ENST00000577393 APPP05067 770 aa31.61■■■□□ 2.65
PPP4R1-204ENST00000577393 OSBPP22059 807 aa31.61■■■□□ 2.65
PPP4R1-204ENST00000577393 USP17L2Q6R6M4 530 aa31.61■■■□□ 2.65
PPP4R1-204ENST00000577393 ACER1Q8TDN7 264 aa31.61■■■□□ 2.65
PPP4R1-204ENST00000577393 FEZ1Q99689 392 aa31.61■■■□□ 2.65
PPP4R1-204ENST00000577393 ASCC2Q9H1I8 757 aaPredicted RBP31.61■■■□□ 2.65
PPP4R1-204ENST00000577393 CTGFP29279 349 aa31.6■■■□□ 2.65
PPP4R1-204ENST00000577393 ZSWIM8A7E2V4 1837 aa31.59■■■□□ 2.65
PPP4R1-204ENST00000577393 TRIM6-TRIM34B2RNG4 842 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms