RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	SUGT1	Q9Y2Z0	365 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	MAST3	O60307	1309 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	SOWAHB	A6NEL2	793 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	INPP5B	P32019	993 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CCDC57	Q2TAC2	916 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	GPAT2	Q6NUI2	795 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FASTKD5	Q7L8L6	764 aa	Known RBP	11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	TSPYL6	Q8N831	410 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	DNAAF4	Q8WXU2	420 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CNNM1	Q9NRU3	951 aa		11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.69	□□□□□ -0.54
TOM1L1-223	ENST00000576932	KDM4A	O75164	1064 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	ELN	P15502	786 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	GYG1	P46976	350 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CACNB3	P54284	484 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FLII	Q13045	1269 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	TAF7L	Q5H9L4	462 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	SH3D19	Q5HYK7	790 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	G2E3	Q7L622	706 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FAM151A	Q8WW52	585 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	TSR3	Q9UJK0	312 aa	Known RBP	11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CHMP3	Q9Y3E7	222 aa		11.68	□□□□□ -0.54
TOM1L1-223	ENST00000576932	LAMA2	P24043	3122 aa	Known RBP	11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	RPTOR	Q8N122	1335 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CACNA1F	O60840	1977 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	TNPO2	O14787	897 aa	Known RBP	11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	PLIN1	O60240	522 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CYP2C8	P10632	490 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	MAGEA10	P43363	369 aa	Predicted RBP	11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	HHIPL2	Q6UWX4	724 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	LMBR1L	Q6UX01	489 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	NYAP1	Q6ZVC0	841 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	ERICH6	Q7L0X2	663 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FBXO33	Q7Z6M2	555 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	C7orf61	Q8IZ16	206 aa		11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
TOM1L1-223	ENST00000576932		A0A0G2JLL6	359 aa	Predicted RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	GCGR	P47871	477 aa		11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FKBP5	Q13451	457 aa	Predicted RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	SKIV2L	Q15477	1246 aa	Known RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	GRIK5	Q16478	980 aa		11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	MIGA2	Q7L4E1	593 aa		11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	VPS37D	Q86XT2	251 aa		11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	DIS3L	Q8TF46	1054 aa	Known RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	COA7	Q96BR5	231 aa		11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	UBE2O	Q9C0C9	1292 aa	Known RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	PRDM6	Q9NQX0	595 aa		11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.66	□□□□□ -0.54
TOM1L1-223	ENST00000576932	MROH5	Q6ZUA9	1318 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	COL2A1	P02458	1487 aa	Predicted RBP	11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	APAF1	O14727	1248 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	HMGCR	P04035	888 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CFH	P08603	1231 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	TWISTNB	Q3B726	338 aa	Predicted RBP	11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	CAVIN4	Q5BKX8	364 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	ZNF594	Q96JF6	807 aa	Predicted RBP	11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	TBC1D2	Q9BYX2	928 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	EYS	Q5T1H1	3165 aa		11.65	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FAM110C	Q1W6H9	321 aa		11.64	□□□□□ -0.55
TOM1L1-223	ENST00000576932	C11orf49	Q9H6J7	331 aa		11.64	□□□□□ -0.55
TOM1L1-223	ENST00000576932	HMX1	Q9NP08	348 aa	Predicted RBP	11.64	□□□□□ -0.55
TOM1L1-223	ENST00000576932	KIF16B	Q96L93	1317 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	GRM8	O00222	908 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	FRAT2	O75474	233 aa	Predicted RBP	11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	CHAF1A	Q13111	956 aa	Predicted RBP	11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	EPHA10	Q5JZY3	1008 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	BEND3	Q5T5X7	828 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	SCYL3	Q8IZE3	742 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	GUCD1	Q96NT3	240 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	OGDHL	Q9ULD0	1010 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	AFG3L2	Q9Y4W6	797 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	DOCK3	Q8IZD9	2030 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	TTC28	Q96AY4	2481 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	PRUNE2	Q8WUY3	3088 aa		11.63	□□□□□ -0.55
TOM1L1-223	ENST00000576932	MUC3A	Q02505	3323 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	SYN1	P17600	705 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	PICK1	Q9NRD5	415 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	AGTPBP1	Q9UPW5	1226 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	ZHX2	Q9Y6X8	837 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	DDX60L	Q5H9U9	1706 aa	Known RBP	11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	ATRNL1	Q5VV63	1379 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	PTPRF	P10586	1907 aa		11.62	□□□□□ -0.55
TOM1L1-223	ENST00000576932	PHF20L1	A8MW92	1017 aa		11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	PTPRA	P18433	802 aa		11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	CLK2	P49760	499 aa	Known RBP	11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	MAP3K10	Q02779	954 aa		11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	WDR66	Q8TBY9	1149 aa		11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	SPIRE2	Q8WWL2	714 aa		11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	TSR2	Q969E8	191 aa	Known RBP	11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	KCTD12	Q96CX2	325 aa	Known RBP	11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.61	□□□□□ -0.55
TOM1L1-223	ENST00000576932	AK9	Q5TCS8	1911 aa		11.6	□□□□□ -0.55
TOM1L1-223	ENST00000576932	PDE8B	O95263	885 aa		11.6	□□□□□ -0.55
TOM1L1-223	ENST00000576932	COL6A1	P12109	1028 aa		11.6	□□□□□ -0.55
TOM1L1-223	ENST00000576932	GCLC	P48506	637 aa	Predicted RBP	11.6	□□□□□ -0.55
TOM1L1-223	ENST00000576932	CCDC27	Q2M243	656 aa		11.6	□□□□□ -0.55

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