RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 PRDM1O75626 825 aa17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 ASNSP08243 561 aa17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 RRP12Q5JTH9 1297 aaKnown RBP17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 CCDC17Q96LX7 622 aa17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
NPLOC4-209ENST00000572760 ECE1P42892 770 aa17.2■□□□□ 0.34
NPLOC4-209ENST00000572760 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
NPLOC4-209ENST00000572760 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
NPLOC4-209ENST00000572760 SNCAIPQ9Y6H5 919 aa17.2■□□□□ 0.34
NPLOC4-209ENST00000572760 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 RANBP6O60518 1105 aaKnown RBP17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 GH2P01242 217 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 AKR1B1P15121 316 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 TRDNQ13061 729 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
NPLOC4-209ENST00000572760 TSPY2A6NKD2 308 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 CYP21A2P08686 494 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 RASA1P20936 1047 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 MCCP23508 829 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 CREB3L3Q68CJ9 461 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 STAG1Q8WVM7 1258 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 WNK4Q96J92 1243 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 CAPNS2Q96L46 248 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 INCENPQ9NQS7 918 aa17.18■□□□□ 0.34
NPLOC4-209ENST00000572760 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 USP17L5A8MUK1 530 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 ORC4O43929 436 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 PTPRAP18433 802 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 TFAP4Q01664 338 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 PPATQ06203 517 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 FAM47AQ5JRC9 791 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 RASAL3Q86YV0 1011 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 KRT23Q9C075 422 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 CNNM2Q9H8M5 875 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 ZHX2Q9Y6X8 837 aa17.17■□□□□ 0.34
NPLOC4-209ENST00000572760 PTPRFP10586 1907 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 SLC27A2O14975 620 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 SLC10A3P09131 477 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 SEPT2Q15019 361 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 NECTIN1Q15223 517 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 SPRYD7Q5W111 196 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 CCDC84Q86UT8 332 aaPredicted RBP17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 ESR2Q92731 530 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 TBC1D2Q9BYX2 928 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
NPLOC4-209ENST00000572760 FGRP09769 529 aa17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 ZBTB48P10074 688 aaPredicted RBP17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 JAG1P78504 1218 aa17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 PPIL2Q13356 520 aa17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 C8orf34Q49A92 452 aa17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 GREB1LQ9C091 1923 aaPredicted RBP17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 WDR33Q9C0J8 1336 aaKnown RBP17.15■□□□□ 0.34
NPLOC4-209ENST00000572760 B4E1Z4 1266 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 E7EWF7 191 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 NT5C2P49902 561 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 SPP2Q13103 211 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 NOGQ13253 232 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 ZNF280CQ8ND82 737 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 NCOA7Q8NI08 942 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 FEZ1Q99689 392 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 ARHGEF10LQ9HCE6 1279 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 NEDD4P46934 1319 aa17.14■□□□□ 0.33
NPLOC4-209ENST00000572760 TRIM75PA6NK02 468 aa17.13■□□□□ 0.33
NPLOC4-209ENST00000572760 IRF6O14896 467 aa17.13■□□□□ 0.33
NPLOC4-209ENST00000572760 KDM4AO75164 1064 aa17.13■□□□□ 0.33
NPLOC4-209ENST00000572760 HSPA4P34932 840 aa17.13■□□□□ 0.33
NPLOC4-209ENST00000572760 VEGFBP49765 207 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms