RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PCNTO95613 3336 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 PLEKHH1Q9ULM0 1364 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 NRAPQ86VF7 1730 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 RREB1Q92766 1687 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 CDC27P30260 824 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 ZNF423Q2M1K9 1284 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 RELL1Q8IUW5 271 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 PHC3Q8NDX5 983 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 ZNF526Q8TF50 670 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-214ENST00000572365 NUDT8Q8WV74 236 aa7.87□□□□□ -1.15
SF3B3-214ENST00000572365 SREK1Q8WXA9 508 aaKnown RBP7.87□□□□□ -1.15
SF3B3-214ENST00000572365 NAIPQ13075 1403 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 NUP155O75694 1391 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 LRPPRCP42704 1394 aaKnown RBP7.86□□□□□ -1.15
SF3B3-214ENST00000572365 OIP5O43482 229 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 ALBP02768 609 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 ESRRAP11474 423 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-214ENST00000572365 EPHA1P21709 976 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 TNNI2P48788 182 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 LIG3P49916 1009 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 PPP2R3AQ06190 1150 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 NUTM2GQ5VZR2 741 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 GDF6Q6KF10 455 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-214ENST00000572365 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 RHOVQ96L33 236 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 CAPN10Q9HC96 672 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 JPH1Q9HDC5 661 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-214ENST00000572365 KCNQ5Q9NR82 932 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 SH2B1Q9NRF2 756 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-214ENST00000572365 GPN3Q9UHW5 284 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-214ENST00000572365 ABCA3Q99758 1704 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 DISP2A7MBM2 1401 aa7.86□□□□□ -1.15
SF3B3-214ENST00000572365 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 PAGE1O75459 146 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 GBP2P32456 591 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-214ENST00000572365 GJA8P48165 433 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 AFF1P51825 1210 aaKnown RBP7.85□□□□□ -1.15
SF3B3-214ENST00000572365 RPS26P62854 115 aaKnown RBP7.85□□□□□ -1.15
SF3B3-214ENST00000572365 GNL2Q13823 731 aaKnown RBP7.85□□□□□ -1.15
SF3B3-214ENST00000572365 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 AGMOQ6ZNB7 445 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 CHSY3Q70JA7 882 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 GALNT6Q8NCL4 622 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 PRDM6Q9NQX0 595 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 ADAMTS1Q9UHI8 967 aa7.85□□□□□ -1.15
SF3B3-214ENST00000572365 H3BRJ5 948 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 LILRB5O75023 590 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 BCRP11274 1271 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 CABP4P57796 275 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 IKBKEQ14164 716 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
SF3B3-214ENST00000572365 MAP3K11Q16584 847 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 PCNX4Q63HM2 1172 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 TTBK2Q6IQ55 1244 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 BTBD6Q96KE9 485 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 GMLQ99445 158 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 SOX17Q9H6I2 414 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-214ENST00000572365 INPP5FQ9Y2H2 1132 aa7.84□□□□□ -1.15
SF3B3-214ENST00000572365 NEXMIFQ5QGS0 1516 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 SPATA31A1Q5TZJ5 1347 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 SHISA8B8ZZ34 492 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 M0R082 166 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 SOX1O00570 391 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-214ENST00000572365 EIF4A3P38919 411 aaKnown RBP7.83□□□□□ -1.16
SF3B3-214ENST00000572365 EVA1CP58658 441 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 LMNB2Q03252 620 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 PAK2Q13177 524 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 KIAA0825Q8IV33 1275 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 IL22RA1Q8N6P7 574 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 ZNF417Q8TAU3 575 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 DRC1Q96MC2 740 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 ZNF587Q96SQ5 575 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-214ENST00000572365 PRDM11Q9NQV5 511 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 TLR6Q9Y2C9 796 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 SAMM50Q9Y512 469 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 PPME1Q9Y570 386 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 TECPR2O15040 1411 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 TNS3Q68CZ2 1445 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 THSD7AQ9UPZ6 1657 aa7.83□□□□□ -1.16
SF3B3-214ENST00000572365 KIF1BO60333 1816 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 CASZ1Q86V15 1759 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 MINDY4BA8MYZ0 360 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 F6X3S4 739 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 BMP6P22004 513 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 NME2P22392 152 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 GMPRP36959 345 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 ZNF157P51786 506 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-214ENST00000572365 RASGRP4Q8TDF6 673 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 WNT8BQ93098 351 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 SPON2Q9BUD6 331 aa7.82□□□□□ -1.16
SF3B3-214ENST00000572365 CLTCL1P53675 1640 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 IQGAP3Q86VI3 1631 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 ADGRB2O60241 1585 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 HFM1A2PYH4 1435 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 CCDC144AA2RUR9 1427 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-214ENST00000572365 TFE3P19532 575 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-214ENST00000572365 GARTP22102 1010 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 RGL3Q3MIN7 710 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 FBXL19Q6PCT2 694 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms