RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 DOCK1Q14185 1865 aa19.36■□□□□ 0.69
LITAF-210ENST00000571976 A0A0D9SFI3 127 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 USP17L5A8MUK1 530 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 SHMT1P34896 483 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 TDO2P48775 406 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 EVX2Q03828 476 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 CERKLQ49MI3 558 aaPredicted RBP19.35■□□□□ 0.69
LITAF-210ENST00000571976 BRI3BPQ8WY22 251 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 EPB41L4AQ9HCS5 686 aaPredicted RBP19.35■□□□□ 0.69
LITAF-210ENST00000571976 DIAPH3Q9NSV4 1193 aa19.35■□□□□ 0.69
LITAF-210ENST00000571976 BAZ2AQ9UIF9 1905 aaKnown RBP19.35■□□□□ 0.69
LITAF-210ENST00000571976 CYP2D7A0A087X1C5 515 aa19.34■□□□□ 0.69
LITAF-210ENST00000571976 IGF2BP3O00425 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
LITAF-210ENST00000571976 GDF11O95390 407 aa19.34■□□□□ 0.69
LITAF-210ENST00000571976 CCDC129Q6ZRS4 1044 aa19.34■□□□□ 0.69
LITAF-210ENST00000571976 PTPN18Q99952 460 aa19.34■□□□□ 0.69
LITAF-210ENST00000571976 PPP4R2Q9NY27 417 aa19.34■□□□□ 0.69
LITAF-210ENST00000571976 ZBTB21Q9ULJ3 1066 aa19.34■□□□□ 0.69
LITAF-210ENST00000571976 HSPA8P11142 646 aaKnown RBP19.33■□□□□ 0.68
LITAF-210ENST00000571976 MFAP1P55081 439 aaKnown RBP19.33■□□□□ 0.68
LITAF-210ENST00000571976 JAG1P78504 1218 aa19.33■□□□□ 0.68
LITAF-210ENST00000571976 C16orf86Q6ZW13 317 aa19.33■□□□□ 0.68
LITAF-210ENST00000571976 ZNF280CQ8ND82 737 aa19.33■□□□□ 0.68
LITAF-210ENST00000571976 DYNLL2Q96FJ2 89 aa19.33■□□□□ 0.68
LITAF-210ENST00000571976 NAPBQ9H115 298 aa19.33■□□□□ 0.68
LITAF-210ENST00000571976 AS3MTQ9HBK9 375 aa19.33■□□□□ 0.68
LITAF-210ENST00000571976 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.33■□□□□ 0.68
LITAF-210ENST00000571976 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 GH2P01242 217 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 LBX1P52954 281 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 CWC27Q6UX04 472 aaKnown RBP19.32■□□□□ 0.68
LITAF-210ENST00000571976 CCDC84Q86UT8 332 aaPredicted RBP19.32■□□□□ 0.68
LITAF-210ENST00000571976 SLC44A5Q8NCS7 719 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 WDR18Q9BV38 432 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 CFHR5Q9BXR6 569 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 CABP5Q9NP86 173 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 TSKSQ9UJT2 592 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
LITAF-210ENST00000571976 CCDC171Q6TFL3 1326 aa19.31■□□□□ 0.68
LITAF-210ENST00000571976 A0A0G2JLL6 359 aaPredicted RBP19.31■□□□□ 0.68
LITAF-210ENST00000571976 TRIM75PA6NK02 468 aa19.31■□□□□ 0.68
LITAF-210ENST00000571976 CDK8P49336 464 aa19.31■□□□□ 0.68
LITAF-210ENST00000571976 SPP2Q13103 211 aa19.31■□□□□ 0.68
LITAF-210ENST00000571976 FASTKD5Q7L8L6 764 aaKnown RBP19.31■□□□□ 0.68
LITAF-210ENST00000571976 PRRT2Q7Z6L0 340 aaPredicted RBP19.31■□□□□ 0.68
LITAF-210ENST00000571976 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
LITAF-210ENST00000571976 ZCCHC17Q9NP64 241 aaKnown RBP19.31■□□□□ 0.68
LITAF-210ENST00000571976 PRDM10Q9NQV6 1147 aa19.31■□□□□ 0.68
LITAF-210ENST00000571976 BTBD19C9JJ37 291 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 SMIM22K7EJ46 135 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 FOXP2O15409 715 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 TBC1D8O95759 1140 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 ALX1Q15699 326 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 SHROOM1Q2M3G4 852 aaPredicted RBP19.3■□□□□ 0.68
LITAF-210ENST00000571976 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 ZNF589Q86UQ0 364 aaPredicted RBP19.3■□□□□ 0.68
LITAF-210ENST00000571976 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
LITAF-210ENST00000571976 HSPD1P10809 573 aaKnown RBP19.29■□□□□ 0.68
LITAF-210ENST00000571976 MOGSQ13724 837 aa19.29■□□□□ 0.68
LITAF-210ENST00000571976 ANKRD23Q86SG2 305 aa19.29■□□□□ 0.68
LITAF-210ENST00000571976 FAM43AQ8N2R8 423 aa19.29■□□□□ 0.68
LITAF-210ENST00000571976 ZNF287Q9HBT7 754 aa19.29■□□□□ 0.68
LITAF-210ENST00000571976 ROBO3Q96MS0 1386 aa19.29■□□□□ 0.68
LITAF-210ENST00000571976 MPHOSPH10O00566 681 aaKnown RBP19.28■□□□□ 0.68
LITAF-210ENST00000571976 SLC3A2P08195 630 aaKnown RBP19.28■□□□□ 0.68
LITAF-210ENST00000571976 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
LITAF-210ENST00000571976 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
LITAF-210ENST00000571976 MKNK2Q9HBH9 465 aa19.28■□□□□ 0.68
LITAF-210ENST00000571976 C19orf81C9J6K1 198 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 USP17L10C9JJH3 530 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 FGAP02671 866 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 CHMLP26374 656 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 PPARAQ07869 468 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 TAF1CQ15572 869 aaPredicted RBP19.27■□□□□ 0.68
LITAF-210ENST00000571976 NOM1Q5C9Z4 860 aaKnown RBP19.27■□□□□ 0.68
LITAF-210ENST00000571976 SH3D19Q5HYK7 790 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 GADL1Q6ZQY3 521 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 SKAP1Q86WV1 359 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 RUFY2Q8WXA3 655 aa19.27■□□□□ 0.68
LITAF-210ENST00000571976 PDHXO00330 501 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 AKR1B1P15121 316 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 GUCY1A2P33402 732 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 BACE1P56817 501 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 CRHR2Q13324 411 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 MTMR2Q13614 643 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 SEPT2Q15019 361 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 BMP2KLQ5H9B9 411 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 GPAT2Q6NUI2 795 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 STK11IPQ8N1F8 1099 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 PROCA1Q8NCQ7 364 aaPredicted RBP19.26■□□□□ 0.67
LITAF-210ENST00000571976 ZFYVE28Q9HCC9 887 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 ANAPC4Q9UJX5 808 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 SLC45A1Q9Y2W3 748 aa19.26■□□□□ 0.67
LITAF-210ENST00000571976 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
LITAF-210ENST00000571976 HMGCS2P54868 508 aa19.25■□□□□ 0.67
LITAF-210ENST00000571976 PDE4BQ07343 736 aa19.25■□□□□ 0.67
LITAF-210ENST00000571976 R3HDMLQ9H3Y0 253 aa19.25■□□□□ 0.67
LITAF-210ENST00000571976 TMOD4Q9NZQ9 345 aa19.25■□□□□ 0.67
LITAF-210ENST00000571976 AGTPBP1Q9UPW5 1226 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms