RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ASNSP08243 561 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 TM4SF4P48230 202 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 LBX1P52954 281 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 INHBEP58166 350 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 RAB3GAP1Q15042 981 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 ABCB5Q2M3G0 1257 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
CDT1-203ENST00000569140 C12orf60Q5U649 245 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 GADL1Q6ZQY3 521 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 IFNL3Q8IZI9 196 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 CABP5Q9NP86 173 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 SWAP70Q9UH65 585 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 LAMB1P07942 1786 aa15.31■□□□□ 0.04
CDT1-203ENST00000569140 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDT1-203ENST00000569140 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
CDT1-203ENST00000569140 SHMT1P34896 483 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
CDT1-203ENST00000569140 GIMAP6Q6P9H5 292 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 METTL16Q86W50 562 aaKnown RBP15.3■□□□□ 0.04
CDT1-203ENST00000569140 BRI3BPQ8WY22 251 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
CDT1-203ENST00000569140 MYH8P13535 1937 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 ALDH1A1P00352 501 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 SPP2Q13103 211 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 TATDN1Q6P1N9 297 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
CDT1-203ENST00000569140 FEZ1Q99689 392 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 SAGE1Q9NXZ1 904 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
CDT1-203ENST00000569140 SLC3A2P08195 630 aaKnown RBP15.28■□□□□ 0.04
CDT1-203ENST00000569140 CDK8P49336 464 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 JAG1P78504 1218 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 GABPAQ06546 454 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 TAF1CQ15572 869 aaPredicted RBP15.28■□□□□ 0.04
CDT1-203ENST00000569140 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 ZNF280CQ8ND82 737 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 PTPN18Q99952 460 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
CDT1-203ENST00000569140 BTBD19C9JJ37 291 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 CXCL11O14625 94 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 MTMR2Q13614 643 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
CDT1-203ENST00000569140 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 FAM43AQ8N2R8 423 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 RUFY2Q8WXA3 655 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.04
CDT1-203ENST00000569140 PHIPQ8WWQ0 1821 aa15.27■□□□□ 0.03
CDT1-203ENST00000569140 A0A0G2JLL6 359 aaPredicted RBP15.26■□□□□ 0.03
CDT1-203ENST00000569140 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
CDT1-203ENST00000569140 HSPD1P10809 573 aaKnown RBP15.26■□□□□ 0.03
CDT1-203ENST00000569140 AKR1B1P15121 316 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 HMGCS2P54868 508 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 PPARAQ07869 468 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 SEPT2Q15019 361 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 FASTKD5Q7L8L6 764 aaKnown RBP15.26■□□□□ 0.03
CDT1-203ENST00000569140 PRRT2Q7Z6L0 340 aaPredicted RBP15.26■□□□□ 0.03
CDT1-203ENST00000569140 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 TOMM22Q9NS69 142 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 GINM1Q9NU53 330 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
CDT1-203ENST00000569140 PDHXO00330 501 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 PRDM1O75626 825 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 PDE4BQ07343 736 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 CRHR2Q13324 411 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 DGKZQ13574 1117 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 ZFYVE28Q9HCC9 887 aa15.25■□□□□ 0.03
CDT1-203ENST00000569140 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 FOXP2O15409 715 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 CHMLP26374 656 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 HAND2P61296 217 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 ANKRD23Q86SG2 305 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 CLEC10AQ8IUN9 316 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 ZNF444Q8N0Y2 327 aaPredicted RBP15.24■□□□□ 0.03
CDT1-203ENST00000569140 CCDC17Q96LX7 622 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
CDT1-203ENST00000569140 RAD50Q92878 1312 aa15.23■□□□□ 0.03
CDT1-203ENST00000569140 RAD21O60216 631 aa15.23■□□□□ 0.03
CDT1-203ENST00000569140 ICA1Q05084 483 aa15.23■□□□□ 0.03
CDT1-203ENST00000569140 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
CDT1-203ENST00000569140 PARK7Q99497 189 aaKnown RBP15.23■□□□□ 0.03
CDT1-203ENST00000569140 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
CDT1-203ENST00000569140 R3HDMLQ9H3Y0 253 aa15.23■□□□□ 0.03
CDT1-203ENST00000569140 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
CDT1-203ENST00000569140 PTPRFP10586 1907 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 C19orf81C9J6K1 198 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms