RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 GNRH1P01148 92 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 HLA-DOAP06340 250 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 ASNSP08243 561 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 ADD2P35612 726 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 PLCD1P51178 756 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 ZNF333Q96JL9 665 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 EHD4Q9H223 541 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
FANCA-220ENST00000566409 BAZ2AQ9UIF9 1905 aaKnown RBP17.76■□□□□ 0.43
FANCA-220ENST00000566409 OSBPP22059 807 aa17.75■□□□□ 0.43
FANCA-220ENST00000566409 BACE1P56817 501 aa17.75■□□□□ 0.43
FANCA-220ENST00000566409 SDR42E1Q8WUS8 393 aa17.75■□□□□ 0.43
FANCA-220ENST00000566409 TRIM34Q9BYJ4 488 aa17.75■□□□□ 0.43
FANCA-220ENST00000566409 SRRDQ9UH36 339 aa17.75■□□□□ 0.43
FANCA-220ENST00000566409 SERPINB13Q9UIV8 391 aa17.75■□□□□ 0.43
FANCA-220ENST00000566409 PRKAB2O43741 272 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
FANCA-220ENST00000566409 GH2P01242 217 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 SHMT1P34896 483 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 MTMR2Q13614 643 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 SLC9C1Q4G0N8 1177 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 SH3TC2Q8TF17 1288 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 ARMT1Q9H993 441 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
FANCA-220ENST00000566409 GINM1Q9NU53 330 aa17.74■□□□□ 0.43
FANCA-220ENST00000566409 GABPAQ06546 454 aa17.73■□□□□ 0.43
FANCA-220ENST00000566409 SMCR8Q8TEV9 937 aaPredicted RBP17.73■□□□□ 0.43
FANCA-220ENST00000566409 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
FANCA-220ENST00000566409 CRNKL1Q9BZJ0 848 aaKnown RBP17.73■□□□□ 0.43
FANCA-220ENST00000566409 ASCC2Q9H1I8 757 aaPredicted RBP17.73■□□□□ 0.43
FANCA-220ENST00000566409 ECHDC1Q9NTX5 307 aa17.73■□□□□ 0.43
FANCA-220ENST00000566409 SMIM22K7EJ46 135 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 MBD4O95243 580 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 CYP2D6P10635 497 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 PRMT2P55345 433 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 UBE3CQ15386 1083 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 ANKRD13CQ8N6S4 541 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 EMILIN3Q9NT22 766 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 GABRQQ9UN88 632 aa17.72■□□□□ 0.43
FANCA-220ENST00000566409 USP17L10C9JJH3 530 aa17.71■□□□□ 0.43
FANCA-220ENST00000566409 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
FANCA-220ENST00000566409 EN2P19622 333 aaPredicted RBP17.71■□□□□ 0.43
FANCA-220ENST00000566409 FCGRTP55899 365 aa17.71■□□□□ 0.43
FANCA-220ENST00000566409 PRKCZQ05513 592 aa17.71■□□□□ 0.43
FANCA-220ENST00000566409 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
FANCA-220ENST00000566409 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.43
FANCA-220ENST00000566409 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.71■□□□□ 0.438e-7■■■□□ 17.4
FANCA-220ENST00000566409 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
FANCA-220ENST00000566409 MYPNQ86TC9 1320 aa17.71■□□□□ 0.42
FANCA-220ENST00000566409 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
FANCA-220ENST00000566409 MYCP01106 439 aaPredicted RBP17.7■□□□□ 0.42
FANCA-220ENST00000566409 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
FANCA-220ENST00000566409 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
FANCA-220ENST00000566409 POTEEQ6S8J3 1075 aa17.7■□□□□ 0.42
FANCA-220ENST00000566409 NBPF11Q86T75 865 aa17.7■□□□□ 0.42
FANCA-220ENST00000566409 P2RX7Q99572 595 aaKnown RBP17.7■□□□□ 0.42
FANCA-220ENST00000566409 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
FANCA-220ENST00000566409 MYH8P13535 1937 aa17.7■□□□□ 0.42
FANCA-220ENST00000566409 PEX10O60683 326 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 HOXD10P28358 340 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 PABPC4Q13310 644 aaKnown RBP eCLIP17.69■□□□□ 0.42
FANCA-220ENST00000566409 FAM110CQ1W6H9 321 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 ABCB5Q2M3G0 1257 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 ACER1Q8TDN7 264 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 TMOD4Q9NZQ9 345 aa17.69■□□□□ 0.42
FANCA-220ENST00000566409 CYP2D7A0A087X1C5 515 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 GRK4P32298 578 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 GCLCP48506 637 aaPredicted RBP17.68■□□□□ 0.42
FANCA-220ENST00000566409 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 MTFR1Q15390 333 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 RAET1EQ8TD07 263 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 DYNLL2Q96FJ2 89 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 ATP8A2Q9NTI2 1148 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 PLXNB2O15031 1838 aa17.68■□□□□ 0.42
FANCA-220ENST00000566409 FLT3LGP49771 235 aa17.67■□□□□ 0.42
FANCA-220ENST00000566409 USP17L2Q6R6M4 530 aa17.67■□□□□ 0.42
FANCA-220ENST00000566409 TXNRD2Q9NNW7 524 aa17.67■□□□□ 0.42
FANCA-220ENST00000566409 CEP290O15078 2479 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 TNPO2O14787 897 aaKnown RBP17.66■□□□□ 0.42
FANCA-220ENST00000566409 SEPT2Q15019 361 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 ZYXQ15942 572 aaKnown RBP17.66■□□□□ 0.42
FANCA-220ENST00000566409 C12orf60Q5U649 245 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 PI4K2BQ8TCG2 481 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 OSBP2Q969R2 916 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 C12orf42Q96LP6 360 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 STRBPQ96SI9 672 aaKnown RBP17.66■□□□□ 0.42
FANCA-220ENST00000566409 TMEM106CQ9BVX2 250 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 RBPJLQ9UBG7 517 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 MORF4L1Q9UBU8 362 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 SLC4A4Q9Y6R1 1079 aa17.66■□□□□ 0.42
FANCA-220ENST00000566409 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms