RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 TAOK2Q9UL54 1235 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 CEP290O15078 2479 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 PEX10O60683 326 aa23.01■■□□□ 1.27
ABCA3-204ENST00000566200 FARP2O94887 1054 aaPredicted RBP23.01■■□□□ 1.27
ABCA3-204ENST00000566200 CYP7A1P22680 504 aa23.01■■□□□ 1.27
ABCA3-204ENST00000566200 ANTXR1Q9H6X2 564 aa23.01■■□□□ 1.27
ABCA3-204ENST00000566200 MORF4L1Q9UBU8 362 aa23.01■■□□□ 1.27
ABCA3-204ENST00000566200 ZBTB21Q9ULJ3 1066 aa23.01■■□□□ 1.27
ABCA3-204ENST00000566200 IDH1O75874 414 aaKnown RBP23■■□□□ 1.27
ABCA3-204ENST00000566200 HOXA7P31268 230 aaPredicted RBP23■■□□□ 1.27
ABCA3-204ENST00000566200 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
ABCA3-204ENST00000566200 MIGA1Q8NAN2 632 aa23■■□□□ 1.27
ABCA3-204ENST00000566200 PANK1Q8TE04 598 aa23■■□□□ 1.27
ABCA3-204ENST00000566200 DEFB118Q96PH6 123 aa23■■□□□ 1.27
ABCA3-204ENST00000566200 EXOC6BQ9Y2D4 811 aa23■■□□□ 1.27
ABCA3-204ENST00000566200 ALPK3Q96L96 1907 aa23■■□□□ 1.27
ABCA3-204ENST00000566200 DDX60LQ5H9U9 1706 aaKnown RBP22.99■■□□□ 1.27
ABCA3-204ENST00000566200 CHRDL2Q6WN34 429 aa22.99■■□□□ 1.27
ABCA3-204ENST00000566200 P2RX7Q99572 595 aaKnown RBP22.99■■□□□ 1.27
ABCA3-204ENST00000566200 CRISPLD2Q9H0B8 497 aa22.99■■□□□ 1.27
ABCA3-204ENST00000566200 TXNRD2Q9NNW7 524 aa22.99■■□□□ 1.27
ABCA3-204ENST00000566200 POTEEQ6S8J3 1075 aa22.98■■□□□ 1.27
ABCA3-204ENST00000566200 MAGEB6Q8N7X4 407 aa22.98■■□□□ 1.27
ABCA3-204ENST00000566200 HTATIP2Q9BUP3 242 aa22.98■■□□□ 1.27
ABCA3-204ENST00000566200 C19orf81C9J6K1 198 aa22.97■■□□□ 1.27
ABCA3-204ENST00000566200 TRIM32Q13049 653 aa22.97■■□□□ 1.27
ABCA3-204ENST00000566200 GINM1Q9NU53 330 aa22.97■■□□□ 1.27
ABCA3-204ENST00000566200 TMOD4Q9NZQ9 345 aa22.97■■□□□ 1.27
ABCA3-204ENST00000566200 USP17L10C9JJH3 530 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 TFRCP02786 760 aaKnown RBP22.96■■□□□ 1.27
ABCA3-204ENST00000566200 HLA-DOAP06340 250 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 HERVK_113P62684 666 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 IRX3P78415 501 aaPredicted RBP22.96■■□□□ 1.27
ABCA3-204ENST00000566200 AACSQ86V21 672 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 TRIM34Q9BYJ4 488 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.96■■□□□ 1.27
ABCA3-204ENST00000566200 PRO3102Q9H379 93 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 EMILIN3Q9NT22 766 aa22.96■■□□□ 1.27
ABCA3-204ENST00000566200 RBM27Q9P2N5 1060 aaKnown RBP22.96■■□□□ 1.27
ABCA3-204ENST00000566200 TATDN1Q6P1N9 297 aa22.95■■□□□ 1.26
ABCA3-204ENST00000566200 ZBED9Q6R2W3 1325 aa22.95■■□□□ 1.26
ABCA3-204ENST00000566200 RBPJLQ9UBG7 517 aa22.95■■□□□ 1.26
ABCA3-204ENST00000566200 TRIOBPQ9H2D6 2365 aa22.94■■□□□ 1.26
ABCA3-204ENST00000566200 RANBP2P49792 3224 aaKnown RBP22.94■■□□□ 1.26
ABCA3-204ENST00000566200 GH2P01242 217 aa22.94■■□□□ 1.26
ABCA3-204ENST00000566200 HMGCRP04035 888 aa22.94■■□□□ 1.26
ABCA3-204ENST00000566200 TRIB2Q92519 343 aa22.94■■□□□ 1.26
ABCA3-204ENST00000566200 RIOK1Q9BRS2 568 aaKnown RBP22.94■■□□□ 1.26
ABCA3-204ENST00000566200 IL1RAPL2Q9NP60 686 aa22.94■■□□□ 1.26
ABCA3-204ENST00000566200 NAV1Q8NEY1 1877 aa22.94■■□□□ 1.26
ABCA3-204ENST00000566200 USP5P45974 858 aa22.93■■□□□ 1.26
ABCA3-204ENST00000566200 Q3C1V9 767 aa22.93■■□□□ 1.26
ABCA3-204ENST00000566200 ERC1Q8IUD2 1116 aa22.93■■□□□ 1.26
ABCA3-204ENST00000566200 DIS3LQ8TF46 1054 aaKnown RBP22.93■■□□□ 1.26
ABCA3-204ENST00000566200 EHD4Q9H223 541 aa22.93■■□□□ 1.26
ABCA3-204ENST00000566200 CAPN2P17655 700 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 MAP3K12Q12852 859 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 CERS3Q8IU89 383 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 GPRC5AQ8NFJ5 357 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 RHPN1Q8TCX5 695 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 PAWRQ96IZ0 340 aaKnown RBP22.92■■□□□ 1.26
ABCA3-204ENST00000566200 SERPINB13Q9UIV8 391 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 SZT2Q5T011 3432 aa22.92■■□□□ 1.26
ABCA3-204ENST00000566200 RPTORQ8N122 1335 aa22.91■■□□□ 1.26
ABCA3-204ENST00000566200 CYP2B6P20813 491 aa22.91■■□□□ 1.26
ABCA3-204ENST00000566200 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
ABCA3-204ENST00000566200 USP17L2Q6R6M4 530 aa22.91■■□□□ 1.26
ABCA3-204ENST00000566200 PORCNQ9H237 461 aa22.91■■□□□ 1.26
ABCA3-204ENST00000566200 NR2E3Q9Y5X4 410 aa22.91■■□□□ 1.26
ABCA3-204ENST00000566200 MNX1P50219 401 aaPredicted RBP22.9■■□□□ 1.26
ABCA3-204ENST00000566200 PLCD1P51178 756 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 ERVK-9P63128 1117 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 ERVK-24P63145 666 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 EVX2Q03828 476 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 MAP3K21Q5TCX8 1036 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 USP6NLQ92738 828 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 C12orf42Q96LP6 360 aa22.9■■□□□ 1.26
ABCA3-204ENST00000566200 SHMT1P34896 483 aa22.89■■□□□ 1.25
ABCA3-204ENST00000566200 ZYXQ15942 572 aaKnown RBP22.89■■□□□ 1.25
ABCA3-204ENST00000566200 TMED8Q6PL24 325 aaPredicted RBP22.89■■□□□ 1.25
ABCA3-204ENST00000566200 ACER1Q8TDN7 264 aa22.89■■□□□ 1.25
ABCA3-204ENST00000566200 HMX1Q9NP08 348 aaPredicted RBP22.89■■□□□ 1.25
ABCA3-204ENST00000566200 EVI5O60447 810 aa22.88■■□□□ 1.25
ABCA3-204ENST00000566200 CNMDO75829 334 aa22.88■■□□□ 1.25
ABCA3-204ENST00000566200 XRCC5P13010 732 aaKnown RBP22.88■■□□□ 1.25
ABCA3-204ENST00000566200 TTC6Q86TZ1 520 aa22.88■■□□□ 1.25
ABCA3-204ENST00000566200 SOCS4Q8WXH5 440 aa22.88■■□□□ 1.25
ABCA3-204ENST00000566200 NUDT12Q9BQG2 462 aa22.88■■□□□ 1.25
ABCA3-204ENST00000566200 PAGR1Q9BTK6 254 aa22.88■■□□□ 1.25
ABCA3-204ENST00000566200 TCRBV5S4A2TA0A5A2 114 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 PDE6AP16499 860 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 MAPK4P31152 587 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 GUCY1A2P33402 732 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 GABPAQ06546 454 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 RAB3GAP1Q15042 981 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 ABCB5Q2M3G0 1257 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 CERKLQ49MI3 558 aaPredicted RBP22.87■■□□□ 1.25
ABCA3-204ENST00000566200 HSP90AB4PQ58FF6 505 aa22.87■■□□□ 1.25
ABCA3-204ENST00000566200 GPR142Q7Z601 462 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms