RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
CFDP1-205ENST00000565646 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
CFDP1-205ENST00000565646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
CFDP1-205ENST00000565646 PHF20L1A8MW92 1017 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
CFDP1-205ENST00000565646 ZNF213O14771 459 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 CDK8P49336 464 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 ZNF157P51786 506 aaPredicted RBP15.14■□□□□ 0.01
CFDP1-205ENST00000565646 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
CFDP1-205ENST00000565646 STOX1Q6ZVD7 989 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
CFDP1-205ENST00000565646 PDE4DIPQ5VU43 2346 aa15.14■□□□□ 0.01
CFDP1-205ENST00000565646 EIF5BO60841 1220 aaKnown RBP15.13■□□□□ 0.01
CFDP1-205ENST00000565646 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
CFDP1-205ENST00000565646 TRPA1O75762 1119 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 RASA1P20936 1047 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 COL9A3Q14050 684 aaPredicted RBP15.13■□□□□ 0.01
CFDP1-205ENST00000565646 DOCK1Q14185 1865 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 CRACR2BQ8N4Y2 399 aaPredicted RBP15.13■□□□□ 0.01
CFDP1-205ENST00000565646 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.13■□□□□ 0.01
CFDP1-205ENST00000565646 ZNF112Q9UJU3 913 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 NEDD4P46934 1319 aa15.13■□□□□ 0.01
CFDP1-205ENST00000565646 ORC4O43929 436 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 PRDM1O75626 825 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 JAG1P78504 1218 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 SHROOM1Q2M3G4 852 aaPredicted RBP15.12■□□□□ 0.01
CFDP1-205ENST00000565646 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 PHIPQ8WWQ0 1821 aa15.12■□□□□ 0.01
CFDP1-205ENST00000565646 E7EWF7 191 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 INPP5BP32019 993 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 PRKG1Q13976 671 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 RNF20Q5VTR2 975 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 DCAF15Q66K64 600 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.11■□□□□ 0.01
CFDP1-205ENST00000565646 ZNF341Q9BYN7 854 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
CFDP1-205ENST00000565646 TNRC18O15417 2968 aaPredicted RBP15.1■□□□□ 0.01
CFDP1-205ENST00000565646 SLC3A2P08195 630 aaKnown RBP15.1■□□□□ 0.01
CFDP1-205ENST00000565646 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
CFDP1-205ENST00000565646 NF2P35240 595 aa15.1■□□□□ 0.01
CFDP1-205ENST00000565646 PDE4BQ07343 736 aa15.1■□□□□ 0.01
CFDP1-205ENST00000565646 MAP3K11Q16584 847 aa15.1■□□□□ 0.01
CFDP1-205ENST00000565646 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
CFDP1-205ENST00000565646 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
CFDP1-205ENST00000565646 IL17RAQ96F46 866 aa15.1■□□□□ 0.01
CFDP1-205ENST00000565646 B4E1Z4 1266 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 PPP1R12BO60237 982 aaPredicted RBP15.09■□□□□ 0.01
CFDP1-205ENST00000565646 AKR1B1P15121 316 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 CERKLQ49MI3 558 aaPredicted RBP15.09■□□□□ 0.01
CFDP1-205ENST00000565646 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
CFDP1-205ENST00000565646 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
CFDP1-205ENST00000565646 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 RNF41Q9H4P4 317 aaPredicted RBP15.09■□□□□ 0.01
CFDP1-205ENST00000565646 MKNK2Q9HBH9 465 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
CFDP1-205ENST00000565646 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
CFDP1-205ENST00000565646 UBE2Q2LH0YL09 131 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 CTNND1O60716 968 aaKnown RBP15.08■□□□□ 0
CFDP1-205ENST00000565646 GDF11O95390 407 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 SLC10A3P09131 477 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 ZKSCAN1P17029 563 aaPredicted RBP15.08■□□□□ 0
CFDP1-205ENST00000565646 GUCY1A2P33402 732 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 CAP2P40123 477 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 RBM25P49756 843 aaKnown RBP15.08■□□□□ 0
CFDP1-205ENST00000565646 SOX10P56693 466 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 FAM47AQ5JRC9 791 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 RRP12Q5JTH9 1297 aaKnown RBP15.08■□□□□ 0
CFDP1-205ENST00000565646 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
CFDP1-205ENST00000565646 CCDC17Q96LX7 622 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 TBC1D32Q96NH3 1257 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 KIF2CQ99661 725 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 C22orf23Q9BZE7 217 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 PLIN4Q96Q06 1357 aa15.08■□□□□ 0
CFDP1-205ENST00000565646 PTPRFP10586 1907 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
CFDP1-205ENST00000565646 GH2P01242 217 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 MCCP23508 829 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 IREB2P48200 963 aaKnown RBP15.07■□□□□ 0
CFDP1-205ENST00000565646 ANAPC15P60006 121 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 FKBP1BP68106 108 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 MAP3K9P80192 1104 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 VGLL4Q14135 290 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 NOL9Q5SY16 702 aaKnown RBP15.07■□□□□ 0
CFDP1-205ENST00000565646 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 ARMC9Q7Z3E5 817 aa15.07■□□□□ 0
CFDP1-205ENST00000565646 MB21D2Q8IYB1 491 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms