RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FPGT-TNNI3KV9GXZ4 949 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 USP17L10C9JJH3 530 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 CCER2I3L3R5 266 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 CYP2E1P05181 493 aaPredicted RBP22.89■■□□□ 1.25
NME3-204ENST00000563498 BMP8BP34820 402 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 HERVK_113P62684 666 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 JAG1P78504 1218 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 TRIM32Q13049 653 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 MAP3K21Q5TCX8 1036 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 ADGRA1Q86SQ6 560 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 CRACR2BQ8N4Y2 399 aaPredicted RBP22.89■■□□□ 1.25
NME3-204ENST00000563498 TRIB2Q92519 343 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 DBNDD2Q9BQY9 259 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 TRIM34Q9BYJ4 488 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 OGDHLQ9ULD0 1010 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 TNNQ9UQP3 1299 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 CDK5RAP2Q96SN8 1893 aa22.89■■□□□ 1.25
NME3-204ENST00000563498 BCAR3O75815 825 aa22.88■■□□□ 1.25
NME3-204ENST00000563498 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
NME3-204ENST00000563498 TRMT44Q8IYL2 757 aaKnown RBP22.88■■□□□ 1.25
NME3-204ENST00000563498 SSH3Q8TE77 659 aa22.88■■□□□ 1.25
NME3-204ENST00000563498 GTF3C2Q8WUA4 911 aaPredicted RBP22.88■■□□□ 1.25
NME3-204ENST00000563498 CLUAP1Q96AJ1 413 aa22.88■■□□□ 1.25
NME3-204ENST00000563498 GDF15Q99988 308 aa22.88■■□□□ 1.25
NME3-204ENST00000563498 NUDT12Q9BQG2 462 aa22.88■■□□□ 1.25
NME3-204ENST00000563498 ZBTB21Q9ULJ3 1066 aa22.88■■□□□ 1.25
NME3-204ENST00000563498 CYP2B6P20813 491 aa22.87■■□□□ 1.25
NME3-204ENST00000563498 MAPK4P31152 587 aa22.87■■□□□ 1.25
NME3-204ENST00000563498 TXNRD2Q9NNW7 524 aa22.87■■□□□ 1.25
NME3-204ENST00000563498 PALD1Q9ULE6 856 aa22.87■■□□□ 1.25
NME3-204ENST00000563498 DDX60LQ5H9U9 1706 aaKnown RBP22.86■■□□□ 1.25
NME3-204ENST00000563498 SOX1O00570 391 aaPredicted RBP22.86■■□□□ 1.25
NME3-204ENST00000563498 HLA-DOAP06340 250 aa22.86■■□□□ 1.25
NME3-204ENST00000563498 OS9Q13438 667 aaPredicted RBP22.86■■□□□ 1.25
NME3-204ENST00000563498 C7orf61Q8IZ16 206 aa22.86■■□□□ 1.25
NME3-204ENST00000563498 TMEM57Q8N5G2 664 aa22.86■■□□□ 1.25
NME3-204ENST00000563498 C11orf49Q9H6J7 331 aa22.86■■□□□ 1.25
NME3-204ENST00000563498 RBPJLQ9UBG7 517 aa22.86■■□□□ 1.25
NME3-204ENST00000563498 GDF11O95390 407 aa22.85■■□□□ 1.25
NME3-204ENST00000563498 PRKAR2AP13861 404 aaKnown RBP22.85■■□□□ 1.25
NME3-204ENST00000563498 ATP8B2P98198 1209 aa22.85■■□□□ 1.25
NME3-204ENST00000563498 PDE3AQ14432 1141 aa22.85■■□□□ 1.25
NME3-204ENST00000563498 CERS3Q8IU89 383 aa22.85■■□□□ 1.25
NME3-204ENST00000563498 LAMA3Q16787 3333 aa22.84■■□□□ 1.25
NME3-204ENST00000563498 ZAP70P43403 619 aa22.84■■□□□ 1.25
NME3-204ENST00000563498 ERVK-9P63128 1117 aa22.84■■□□□ 1.25
NME3-204ENST00000563498 ERVK-24P63145 666 aa22.84■■□□□ 1.25
NME3-204ENST00000563498 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
NME3-204ENST00000563498 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
NME3-204ENST00000563498 USP6NLQ92738 828 aa22.84■■□□□ 1.25
NME3-204ENST00000563498 SURF6O75683 361 aaKnown RBP22.83■■□□□ 1.25
NME3-204ENST00000563498 ZKSCAN1P17029 563 aaPredicted RBP22.83■■□□□ 1.25
NME3-204ENST00000563498 GPR153Q6NV75 609 aa22.83■■□□□ 1.25
NME3-204ENST00000563498 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
NME3-204ENST00000563498 LRCH3Q96II8 777 aa22.83■■□□□ 1.25
NME3-204ENST00000563498 PIH1D3Q9NQM4 214 aaKnown RBP22.83■■□□□ 1.25
NME3-204ENST00000563498 EMILIN3Q9NT22 766 aa22.83■■□□□ 1.25
NME3-204ENST00000563498 DBNLQ9UJU6 430 aaKnown RBP22.83■■□□□ 1.25
NME3-204ENST00000563498 NOP58Q9Y2X3 529 aaKnown RBP22.83■■□□□ 1.25
NME3-204ENST00000563498 MYO5AQ9Y4I1 1855 aaKnown RBP22.82■■□□□ 1.24
NME3-204ENST00000563498 PEX10O60683 326 aa22.82■■□□□ 1.24
NME3-204ENST00000563498 RGS2P41220 211 aa22.82■■□□□ 1.24
NME3-204ENST00000563498 Q3C1V9 767 aa22.82■■□□□ 1.24
NME3-204ENST00000563498 MORN1Q5T089 497 aa22.82■■□□□ 1.24
NME3-204ENST00000563498 TMED8Q6PL24 325 aaPredicted RBP22.82■■□□□ 1.24
NME3-204ENST00000563498 GPR142Q7Z601 462 aa22.82■■□□□ 1.24
NME3-204ENST00000563498 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
NME3-204ENST00000563498 C12orf42Q96LP6 360 aa22.82■■□□□ 1.24
NME3-204ENST00000563498 SAP30BPQ9UHR5 308 aaKnown RBP22.82■■□□□ 1.24
NME3-204ENST00000563498 ZMYND8Q9ULU4 1186 aaPredicted RBP22.82■■□□□ 1.24
NME3-204ENST00000563498 CYP7A1P22680 504 aa22.81■■□□□ 1.24
NME3-204ENST00000563498 DYNLL1P63167 89 aaKnown RBP22.81■■□□□ 1.24
NME3-204ENST00000563498 TATDN1Q6P1N9 297 aa22.81■■□□□ 1.24
NME3-204ENST00000563498 PLEKHH3Q7Z736 793 aa22.81■■□□□ 1.24
NME3-204ENST00000563498 EHD4Q9H223 541 aa22.81■■□□□ 1.24
NME3-204ENST00000563498 PORCNQ9H237 461 aa22.81■■□□□ 1.24
NME3-204ENST00000563498 GH2P01242 217 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 COL6A1P12109 1028 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 CACNB2Q08289 660 aaPredicted RBP22.8■■□□□ 1.24
NME3-204ENST00000563498 POTEEQ6S8J3 1075 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 APBA2Q99767 749 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 PAGR1Q9BTK6 254 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 RABGAP1Q9Y3P9 1069 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 PFASO15067 1338 aa22.8■■□□□ 1.24
NME3-204ENST00000563498 SERPINB13Q9UIV8 391 aa22.79■■□□□ 1.24
NME3-204ENST00000563498 USP17L15C9J2P7 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L13C9JLJ4 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L11C9JVI0 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L18D6R9N7 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L22D6RA61 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L17D6RBQ6 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L19D6RCP7 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L20D6RJB6 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 IDH1O75874 414 aaKnown RBP22.78■■□□□ 1.24
NME3-204ENST00000563498 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
NME3-204ENST00000563498 USP14P54578 494 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 CCNA1P78396 465 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 USP17L24Q0WX57 530 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 LRIT3Q3SXY7 679 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 LHX8Q68G74 356 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms