RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 MRPL41Q8IXM3 137 aaKnown RBP8.03□□□□□ -1.12
LINC00254-201ENST00000563416 LRRC3Q9BY71 257 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 CST3P01034 146 aaPredicted RBP8.02□□□□□ -1.13
LINC00254-201ENST00000563416 MLECQ14165 292 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 PRAMEF13Q5VWM6 474 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 DTX1Q86Y01 620 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 KIAA0825Q8IV33 1275 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 TMEM87BQ96K49 555 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 MIPEPQ99797 713 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 MKNK2Q9HBH9 465 aa8.02□□□□□ -1.13
LINC00254-201ENST00000563416 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 TLR3O15455 904 aaKnown RBP8.01□□□□□ -1.13
LINC00254-201ENST00000563416 GREM1O60565 184 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 SPINK2P20155 84 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 YARSP54577 528 aaKnown RBP8.01□□□□□ -1.13
LINC00254-201ENST00000563416 MSMPQ1L6U9 139 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 MCATQ8IVS2 390 aaKnown RBP8.01□□□□□ -1.13
LINC00254-201ENST00000563416 SPON2Q9BUD6 331 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 BSDC1Q9NW68 430 aaPredicted RBP8.01□□□□□ -1.13
LINC00254-201ENST00000563416 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
LINC00254-201ENST00000563416 TJP2Q9UDY2 1190 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 ADAMTS1Q9UHI8 967 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 SMARCA2P51531 1590 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 PRR36Q9H6K5 1346 aa8.01□□□□□ -1.13
LINC00254-201ENST00000563416 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
LINC00254-201ENST00000563416 MED26O95402 600 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 RANGAP1P46060 587 aaPredicted RBP8□□□□□ -1.13
LINC00254-201ENST00000563416 APOBRQ0VD83 1088 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 TMEM201Q5SNT2 666 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 FBXO27Q8NI29 283 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
LINC00254-201ENST00000563416 NT5C1AQ9BXI3 368 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 PRDM5Q9NQX1 630 aaPredicted RBP8□□□□□ -1.13
LINC00254-201ENST00000563416 ZC3H7BQ9UGR2 993 aaKnown RBP8□□□□□ -1.13
LINC00254-201ENST00000563416 TPX2Q9ULW0 747 aaKnown RBP8□□□□□ -1.13
LINC00254-201ENST00000563416 ANGEL1Q9UNK9 670 aaKnown RBP8□□□□□ -1.13
LINC00254-201ENST00000563416 MAPK8IP1Q9UQF2 711 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 CORINQ9Y5Q5 1042 aa8□□□□□ -1.13
LINC00254-201ENST00000563416 HMGXB3Q12766 1538 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 GNAT3A8MTJ3 354 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 GRIN3BO60391 1043 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 SLITRK5O94991 958 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 CYP7A1P22680 504 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 ZNF394Q53GI3 561 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 LETMD1Q6P1Q0 360 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 FAM13CQ8NE31 585 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 NETO1Q8TDF5 533 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 REV1Q9UBZ9 1251 aa7.99□□□□□ -1.13
LINC00254-201ENST00000563416 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 HTR3BO95264 441 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 EOMESO95936 686 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 WNT11O96014 354 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 VSIG10LQ86VR7 867 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 ZNF654Q8IZM8 581 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 STK11IPQ8N1F8 1099 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 FAM181AQ8N9Y4 354 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 XAGE3Q8WTP9 111 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 NKD1Q969G9 470 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 MISP3Q96FF7 219 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 UBP1Q9NZI7 540 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 POLR3KQ9Y2Y1 108 aaPredicted RBP7.98□□□□□ -1.13
LINC00254-201ENST00000563416 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 ATAD2BQ9ULI0 1458 aa7.98□□□□□ -1.13
LINC00254-201ENST00000563416 PRNPP04156 253 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 CEACAM5P06731 702 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 ZNF165P49910 485 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 OXCT1P55809 520 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 IFI16Q16666 785 aaKnown RBP7.97□□□□□ -1.13
LINC00254-201ENST00000563416 SEZ6Q53EL9 994 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 SFRP5Q5T4F7 317 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 DPH2Q9BQC3 489 aaPredicted RBP7.97□□□□□ -1.13
LINC00254-201ENST00000563416 BRMS1Q9HCU9 246 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 DDX41Q9UJV9 622 aaKnown RBP7.97□□□□□ -1.13
LINC00254-201ENST00000563416 NCAPD3P42695 1498 aa7.97□□□□□ -1.13
LINC00254-201ENST00000563416 MCM4P33991 863 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 ETV3P41162 512 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 CRKP46108 304 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 FAM214BQ7L5A3 538 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 SLFN12Q8IYM2 578 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 REXO1Q8N1G1 1221 aaKnown RBP7.96□□□□□ -1.14
LINC00254-201ENST00000563416 CYB5D2Q8WUJ1 264 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 HEXIM2Q96MH2 286 aaKnown RBP7.96□□□□□ -1.14
LINC00254-201ENST00000563416 KLHL3Q9UH77 587 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 PCDHB14Q9Y5E9 798 aa7.96□□□□□ -1.14
LINC00254-201ENST00000563416 TMEM265A0A087WTH1 108 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 ATE1O95260 518 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 ITIH2P19823 946 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
LINC00254-201ENST00000563416 NT5DC4Q86YG4 428 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 SLITRK4Q8IW52 837 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 PLD6Q8N2A8 252 aaKnown RBP7.95□□□□□ -1.14
LINC00254-201ENST00000563416 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
LINC00254-201ENST00000563416 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 CCDC39Q9UFE4 941 aa7.95□□□□□ -1.14
LINC00254-201ENST00000563416 RBM25P49756 843 aaKnown RBP7.94□□□□□ -1.14
LINC00254-201ENST00000563416 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
LINC00254-201ENST00000563416 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
LINC00254-201ENST00000563416 HRASLS5Q96KN8 279 aa7.94□□□□□ -1.14
LINC00254-201ENST00000563416 SLC5A6Q9Y289 635 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms