RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 METTL16Q86W50 562 aaKnown RBP18.97■□□□□ 0.63
USB1-208ENST00000563207 RAET1EQ8TD07 263 aa18.97■□□□□ 0.63
USB1-208ENST00000563207 SMCR8Q8TEV9 937 aaPredicted RBP18.97■□□□□ 0.63
USB1-208ENST00000563207 SHISA4Q96DD7 197 aa18.97■□□□□ 0.63
USB1-208ENST00000563207 EDC3Q96F86 508 aaKnown RBP18.97■□□□□ 0.63
USB1-208ENST00000563207 HERC5Q9UII4 1024 aaKnown RBP18.97■□□□□ 0.63
USB1-208ENST00000563207 SLC45A1Q9Y2W3 748 aa18.97■□□□□ 0.63
USB1-208ENST00000563207 USP17L5A8MUK1 530 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 PLCG2P16885 1265 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 ATP5JP18859 108 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 GRK4P32298 578 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 PRMT2P55345 433 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 FCGRTP55899 365 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 SLFNL1Q499Z3 407 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
USB1-208ENST00000563207 ECHDC1Q9NTX5 307 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 TTC41PQ6P2S7 1318 aa18.96■□□□□ 0.63
USB1-208ENST00000563207 ELNP15502 786 aa18.95■□□□□ 0.62
USB1-208ENST00000563207 HOXD10P28358 340 aa18.95■□□□□ 0.62
USB1-208ENST00000563207 FLT3LGP49771 235 aa18.95■□□□□ 0.62
USB1-208ENST00000563207 MTMR2Q13614 643 aa18.95■□□□□ 0.62
USB1-208ENST00000563207 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
USB1-208ENST00000563207 CCL5P13501 91 aa18.94■□□□□ 0.62
USB1-208ENST00000563207 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
USB1-208ENST00000563207 CENPQQ7L2Z9 268 aaPredicted RBP18.94■□□□□ 0.62
USB1-208ENST00000563207 FOXP4Q8IVH2 680 aaPredicted RBP18.94■□□□□ 0.62
USB1-208ENST00000563207 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
USB1-208ENST00000563207 PROCA1Q8NCQ7 364 aaPredicted RBP18.94■□□□□ 0.62
USB1-208ENST00000563207 ASCC2Q9H1I8 757 aaPredicted RBP18.94■□□□□ 0.62
USB1-208ENST00000563207 TNPO2O14787 897 aaKnown RBP18.93■□□□□ 0.62
USB1-208ENST00000563207 ERC2O15083 957 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 CHGBP05060 677 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 TTF1Q15361 905 aaPredicted RBP18.93■□□□□ 0.62
USB1-208ENST00000563207 SH3D19Q5HYK7 790 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 TMED8Q6PL24 325 aaPredicted RBP18.93■□□□□ 0.62
USB1-208ENST00000563207 POTEEQ6S8J3 1075 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 RIOK1Q9BRS2 568 aaKnown RBP18.93■□□□□ 0.62
USB1-208ENST00000563207 WDR18Q9BV38 432 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 UNC93B1Q9H1C4 597 aa18.93■□□□□ 0.62
USB1-208ENST00000563207 BIN2Q9UBW5 565 aaPredicted RBP18.93■□□□□ 0.62
USB1-208ENST00000563207 ADCY3O60266 1144 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 MX1P20591 662 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 USP5P45974 858 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 DNAJC2Q99543 621 aaKnown RBP18.92■□□□□ 0.62
USB1-208ENST00000563207 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 STAP2Q9UGK3 403 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 ZBTB21Q9ULJ3 1066 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 PLXNB2O15031 1838 aa18.92■□□□□ 0.62
USB1-208ENST00000563207 DDX60LQ5H9U9 1706 aaKnown RBP18.91■□□□□ 0.62
USB1-208ENST00000563207 GOLIM4O00461 696 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 GH2P01242 217 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 ASNSP08243 561 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 PLCD1P51178 756 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 BACE1P56817 501 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 P2RX7Q99572 595 aaKnown RBP18.91■□□□□ 0.62
USB1-208ENST00000563207 HAUS7Q99871 368 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 RNF208Q9H0X6 261 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 TAOK2Q9UL54 1235 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 SALL3Q9BXA9 1300 aa18.91■□□□□ 0.62
USB1-208ENST00000563207 GLRX3O76003 335 aaKnown RBP18.9■□□□□ 0.62
USB1-208ENST00000563207 PDE6AP16499 860 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 TXNRD2Q9NNW7 524 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 EMILIN3Q9NT22 766 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
USB1-208ENST00000563207 TCRBV5S4A2TA0A5A2 114 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 SMIM22K7EJ46 135 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 INHAP05111 366 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 HLA-DOAP06340 250 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 PDE1AP54750 535 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 ZYXQ15942 572 aaKnown RBP18.89■□□□□ 0.61
USB1-208ENST00000563207 FAM110CQ1W6H9 321 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 TATDN1Q6P1N9 297 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 PNMA3Q9UL41 463 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 ZNF532Q9HCE3 1301 aa18.89■□□□□ 0.61
USB1-208ENST00000563207 MAGEB6P1A0A0J9YX57 407 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 CYP2D6P10635 497 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 TRIM32Q13049 653 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 LCORLQ8N3X6 602 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 SLAIN1Q8ND83 568 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 SDR42E1Q8WUS8 393 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 TBC1D2Q9BYX2 928 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 OSBPL3Q9H4L5 887 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 PAG1Q9NWQ8 432 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 GJD2Q9UKL4 321 aa18.88■□□□□ 0.61
USB1-208ENST00000563207 USP17L10C9JJH3 530 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 GJB1P08034 283 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 SHMT1P34896 483 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 GJA8P48165 433 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 Q3C1V9 767 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 PI4K2BQ8TCG2 481 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
USB1-208ENST00000563207 TMOD4Q9NZQ9 345 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms