RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 GORABQ5T7V8 394 aa8.4□□□□□ -1.06
SPG11-224ENST00000561268 NAA16Q6N069 864 aaPredicted RBP8.4□□□□□ -1.06
SPG11-224ENST00000561268 RHPN1Q8TCX5 695 aa8.4□□□□□ -1.06
SPG11-224ENST00000561268 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.06
SPG11-224ENST00000561268 TRIM17Q9Y577 477 aa8.4□□□□□ -1.06
SPG11-224ENST00000561268 GNRH1P01148 92 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 CTGFP29279 349 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 OS9Q13438 667 aaPredicted RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 PICALMQ13492 652 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 RRP1BQ14684 758 aaKnown RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 B4GALNT3Q6L9W6 998 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 SH3RF3Q8TEJ3 882 aaPredicted RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 MARVELD3Q96A59 401 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 KIF1BPQ96EK5 621 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 ZNF333Q96JL9 665 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 IPO9Q96P70 1041 aaKnown RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 RIOK1Q9BRS2 568 aaKnown RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
SPG11-224ENST00000561268 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 GINM1Q9NU53 330 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 RAI14Q9P0K7 980 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 COG6Q9Y2V7 657 aa8.39□□□□□ -1.07
SPG11-224ENST00000561268 TCRBV5S4A2TA0A5A2 114 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 PDHXO00330 501 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 HMMRO75330 724 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 CAP2P40123 477 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 PRMT2P55345 433 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 SOX10P56693 466 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 C20orf194Q5TEA3 1177 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 AACSQ86V21 672 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 PARK7Q99497 189 aaKnown RBP8.38□□□□□ -1.07
SPG11-224ENST00000561268 TMEM121BQ9BXQ6 578 aaPredicted RBP8.38□□□□□ -1.07
SPG11-224ENST00000561268 CCDC8Q9H0W5 538 aaPredicted RBP8.38□□□□□ -1.07
SPG11-224ENST00000561268 EHD4Q9H223 541 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
SPG11-224ENST00000561268 ANTXR1Q9H6X2 564 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 SNRKQ9NRH2 765 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 AATFQ9NY61 560 aaKnown RBP eCLIP8.38□□□□□ -1.07
SPG11-224ENST00000561268 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.38□□□□□ -1.07
SPG11-224ENST00000561268 AGTPBP1Q9UPW5 1226 aa8.38□□□□□ -1.07
SPG11-224ENST00000561268 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 BAG3O95817 575 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 GABPAQ06546 454 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 FASTKD5Q7L8L6 764 aaKnown RBP8.37□□□□□ -1.07
SPG11-224ENST00000561268 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
SPG11-224ENST00000561268 WDR18Q9BV38 432 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 ARHGAP39Q9C0H5 1083 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.37□□□□□ -1.07
SPG11-224ENST00000561268 PICK1Q9NRD5 415 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 PI4KBQ9UBF8 816 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 TAOK2Q9UL54 1235 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 PTCH2Q9Y6C5 1203 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 ZHX2Q9Y6X8 837 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 LRRC37A2A6NM11 1700 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 LCTP09848 1927 aa8.37□□□□□ -1.07
SPG11-224ENST00000561268 MCM3APO60318 1980 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 ASNSP08243 561 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 IRX6P78412 446 aaPredicted RBP8.36□□□□□ -1.07
SPG11-224ENST00000561268 TTF1Q15361 905 aaPredicted RBP8.36□□□□□ -1.07
SPG11-224ENST00000561268 FAM110CQ1W6H9 321 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 CLASRPQ8N2M8 674 aaKnown RBP8.36□□□□□ -1.07
SPG11-224ENST00000561268 ZNF280CQ8ND82 737 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 C12orf42Q96LP6 360 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 IL1RAPL2Q9NP60 686 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 SRRDQ9UH36 339 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 ZBTB21Q9ULJ3 1066 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 NDUFB9Q9Y6M9 179 aa8.36□□□□□ -1.07
SPG11-224ENST00000561268 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 CEP290O15078 2479 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 IDH1O75874 414 aaKnown RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 PDE6AP16499 860 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 ATP5JP18859 108 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 CYP7A1P22680 504 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 JAG1P78504 1218 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 MAP3K12Q12852 859 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 ARHGEF6Q15052 776 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 TREML2Q5T2D2 321 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 FOXP4Q8IVH2 680 aaPredicted RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 MAPKAPK5Q8IW41 473 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 NOL10Q9BSC4 688 aaKnown RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.35□□□□□ -1.07
SPG11-224ENST00000561268 CPA4Q9UI42 421 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 LTBP2Q14767 1821 aa8.35□□□□□ -1.07
SPG11-224ENST00000561268 SALL3Q9BXA9 1300 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 TRIM75PA6NK02 468 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 SNPHO15079 494 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 CYP2C8P10632 490 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms