RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 CCT6BQ92526 530 aa14.07□□□□□ -0.16
SYNM-203ENST00000560674 MCUR1Q96AQ8 359 aa14.07□□□□□ -0.16
SYNM-203ENST00000560674 PLCB1Q9NQ66 1216 aa14.07□□□□□ -0.16
SYNM-203ENST00000560674 FEZ2Q9UHY8 353 aaPredicted RBP14.07□□□□□ -0.16
SYNM-203ENST00000560674 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
SYNM-203ENST00000560674 FLOT1O75955 427 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 KLHL30Q0D2K2 578 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 GEN1Q17RS7 908 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 PHKBQ93100 1093 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 ARHGEF35A5YM69 484 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
SYNM-203ENST00000560674 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
SYNM-203ENST00000560674 ITIH3Q06033 890 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 TSNAXIP1Q2TAA8 658 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 HHATQ5VTY9 493 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 CRCPO75575 148 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 HIBADHP31937 336 aaKnown RBP14.06□□□□□ -0.16
SYNM-203ENST00000560674 SFMBT2Q5VUG0 894 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 CCDC62Q6P9F0 684 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 WWC3Q9ULE0 1092 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
SYNM-203ENST00000560674 GCP02774 474 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
SYNM-203ENST00000560674 NCAPH2Q6IBW4 605 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 CCDC84Q86UT8 332 aaPredicted RBP14.06□□□□□ -0.16
SYNM-203ENST00000560674 CABLES1Q8TDN4 633 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 PSMB7Q99436 277 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 KIAA0556O60303 1618 aa14.06□□□□□ -0.16
SYNM-203ENST00000560674 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 BRD1O95696 1058 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 SLC8A3P57103 927 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 ARHGEF2Q92974 986 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 IQCDQ96DY2 449 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 XPO4Q9C0E2 1151 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 YTHDC2Q9H6S0 1430 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 JAK2O60674 1132 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 ADCY7P51828 1080 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 TRPC3Q13507 836 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 ARHGAP24Q8N264 748 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 CCDC51Q96ER9 411 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 RPGRIP1Q96KN7 1286 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 PRDM1O75626 825 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 STRN3Q13033 797 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 NUCKS1Q9H1E3 243 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 SDCCAG8Q86SQ7 713 aaPredicted RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 RBM17Q96I25 401 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 CPSF2Q9P2I0 782 aaKnown RBP14.05□□□□□ -0.16
SYNM-203ENST00000560674 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 DYMQ7RTS9 669 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 PEX26Q7Z412 305 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 TM6SF1Q9BZW5 370 aa14.05□□□□□ -0.16
SYNM-203ENST00000560674 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 PDE8AO60658 829 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 STK10O94804 968 aaKnown RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 MIPOL1Q8TD10 442 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 IBTKQ9P2D0 1353 aaPredicted RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 CABP7Q86V35 215 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 IFIH1Q9BYX4 1025 aaKnown RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 SAMD9Q5K651 1589 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 BRD3Q15059 726 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 RBM26Q5T8P6 1007 aaKnown RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 CCDC105Q8IYK2 499 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 SUCLG2Q96I99 432 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 PARP3Q9Y6F1 533 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 USP19O94966 1318 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 CHL1O00533 1208 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 IL13P35225 146 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 EIF6P56537 245 aaKnown RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 PNOCQ13519 176 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 ZNF594Q96JF6 807 aaPredicted RBP14.04□□□□□ -0.16
SYNM-203ENST00000560674 KCNJ14Q9UNX9 436 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
SYNM-203ENST00000560674 HGSO14964 777 aaPredicted RBP14.03□□□□□ -0.16
SYNM-203ENST00000560674 CALCRLQ16602 461 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 LZTS2Q9BRK4 669 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 SH3BP5O60239 455 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 DKC1O60832 514 aaKnown RBP eCLIP14.03□□□□□ -0.16
SYNM-203ENST00000560674 BCRP11274 1271 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 WHAMMP3Q1A5X7 153 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
SYNM-203ENST00000560674 ARHGEF10LQ9HCE6 1279 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 CERS3Q8IU89 383 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 SAR1BQ9Y6B6 198 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 TYW1BQ6NUM6 668 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms