RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 HLA-DOAP06340 250 aa16.98■□□□□ 0.31
TNFAIP2-207ENST00000560562 ADD2P35612 726 aa16.98■□□□□ 0.31
TNFAIP2-207ENST00000560562 PSMC4P43686 418 aa16.98■□□□□ 0.31
TNFAIP2-207ENST00000560562 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
TNFAIP2-207ENST00000560562 SDR42E1Q8WUS8 393 aa16.98■□□□□ 0.31
TNFAIP2-207ENST00000560562 ASNSP08243 561 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 OSBPP22059 807 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 MTMR2Q13614 643 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 SH3D19Q5HYK7 790 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 TATDN1Q6P1N9 297 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 PROCA1Q8NCQ7 364 aaPredicted RBP16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 ZNF333Q96JL9 665 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 EHD4Q9H223 541 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 ARMT1Q9H993 441 aa16.97■□□□□ 0.31
TNFAIP2-207ENST00000560562 SMIM22K7EJ46 135 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 PRKAB2O43741 272 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 CYP2D6P10635 497 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 SHMT1P34896 483 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 KIF22Q14807 665 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 SH3TC2Q8TF17 1288 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 SERPINB13Q9UIV8 391 aa16.96■□□□□ 0.31
TNFAIP2-207ENST00000560562 MBD4O95243 580 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 GH2P01242 217 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 BACE1P56817 501 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 GABPAQ06546 454 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 TRIM34Q9BYJ4 488 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 TBC1D2Q9BYX2 928 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 CRNKL1Q9BZJ0 848 aaKnown RBP16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 DCP1AQ9NPI6 582 aaPredicted RBP16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 SRRDQ9UH36 339 aa16.96■□□□□ 0.3
TNFAIP2-207ENST00000560562 RLFQ13129 1914 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 ARHGEF6Q15052 776 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 SLC9C1Q4G0N8 1177 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 AS3MTQ9HBK9 375 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 MCM9Q9NXL9 1143 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 GABRQQ9UN88 632 aa16.95■□□□□ 0.3
TNFAIP2-207ENST00000560562 CEP290O15078 2479 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 PARP14Q460N5 1801 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 PEX10O60683 326 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 FMNL1O95466 1100 aaPredicted RBP16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 MYCP01106 439 aaPredicted RBP16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 GNRH1P01148 92 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 GUCY1A2P33402 732 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 PRKCZQ05513 592 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 TTC6Q86TZ1 520 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 ANKRD13CQ8N6S4 541 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 MYPNQ86TC9 1320 aa16.94■□□□□ 0.3
TNFAIP2-207ENST00000560562 GREB1LQ9C091 1923 aaPredicted RBP16.93■□□□□ 0.3
TNFAIP2-207ENST00000560562 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
TNFAIP2-207ENST00000560562 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
TNFAIP2-207ENST00000560562 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
TNFAIP2-207ENST00000560562 GINM1Q9NU53 330 aa16.93■□□□□ 0.3
TNFAIP2-207ENST00000560562 CYP2D7A0A087X1C5 515 aa16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 POLR3DP05423 398 aaPredicted RBP16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 EN2P19622 333 aaPredicted RBP16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 DYNLL2Q96FJ2 89 aa16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 PNMA3Q9UL41 463 aa16.92■□□□□ 0.3
TNFAIP2-207ENST00000560562 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 PRMT2P55345 433 aa16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 FCGRTP55899 365 aa16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 MTFR1Q15390 333 aa16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 ABCB5Q2M3G0 1257 aa16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.91■□□□□ 0.3
TNFAIP2-207ENST00000560562 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 PI4K2BQ8TCG2 481 aa16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 P2RX7Q99572 595 aaKnown RBP16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 TXNRD2Q9NNW7 524 aa16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
TNFAIP2-207ENST00000560562 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
TNFAIP2-207ENST00000560562 SEPT2Q15019 361 aa16.89■□□□□ 0.29
TNFAIP2-207ENST00000560562 CLEC10AQ8IUN9 316 aa16.89■□□□□ 0.29
TNFAIP2-207ENST00000560562 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
TNFAIP2-207ENST00000560562 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
TNFAIP2-207ENST00000560562 A0A0G2JMZ2 1700 aa16.89■□□□□ 0.29
TNFAIP2-207ENST00000560562 TNPO2O14787 897 aaKnown RBP16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 COL11A1P12107 1806 aaPredicted RBP16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 HOXD10P28358 340 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 GRK4P32298 578 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 FLT3LGP49771 235 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 OSBP2Q969R2 916 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 C12orf42Q96LP6 360 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 ATP8A2Q9NTI2 1148 aa16.88■□□□□ 0.29
TNFAIP2-207ENST00000560562 A0A1W2PRG0 241 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms