RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PCP11498 1178 aaKnown RBP19.51■□□□□ 0.71
TPM1-219ENST00000559397 PDE4BQ07343 736 aa19.51■□□□□ 0.71
TPM1-219ENST00000559397 COL9A3Q14050 684 aaPredicted RBP19.51■□□□□ 0.71
TPM1-219ENST00000559397 DCAF15Q66K64 600 aa19.51■□□□□ 0.71
TPM1-219ENST00000559397 RBM46Q8TBY0 533 aaKnown RBP19.51■□□□□ 0.71
TPM1-219ENST00000559397 NEK1Q96PY6 1258 aa19.51■□□□□ 0.71
TPM1-219ENST00000559397 RNF41Q9H4P4 317 aaPredicted RBP19.51■□□□□ 0.71
TPM1-219ENST00000559397 MYH8P13535 1937 aa19.51■□□□□ 0.71
TPM1-219ENST00000559397 ORC4O43929 436 aa19.5■□□□□ 0.71
TPM1-219ENST00000559397 MFSD6Q6ZSS7 791 aa19.5■□□□□ 0.71
TPM1-219ENST00000559397 SMC1BQ8NDV3 1235 aa19.5■□□□□ 0.71
TPM1-219ENST00000559397 NKX2-3Q8TAU0 364 aa19.5■□□□□ 0.71
TPM1-219ENST00000559397 INTS4Q96HW7 963 aaKnown RBP19.5■□□□□ 0.71
TPM1-219ENST00000559397 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
TPM1-219ENST00000559397 LIMCH1Q9UPQ0 1083 aa19.5■□□□□ 0.71
TPM1-219ENST00000559397 NEDD4P46934 1319 aa19.5■□□□□ 0.71
TPM1-219ENST00000559397 PHF20L1A8MW92 1017 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 PRDM1O75626 825 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 RRP1BQ14684 758 aaKnown RBP19.49■□□□□ 0.71
TPM1-219ENST00000559397 TRIM34Q9BYJ4 488 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 MKNK2Q9HBH9 465 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 FZD1Q9UP38 647 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 USP2O75604 605 aaPredicted RBP19.49■□□□□ 0.71
TPM1-219ENST00000559397 HMGB1P09429 215 aaKnown RBP19.49■□□□□ 0.71
TPM1-219ENST00000559397 RASA1P20936 1047 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 ZNF341Q9BYN7 854 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 ZNF287Q9HBT7 754 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 ZNF112Q9UJU3 913 aa19.49■□□□□ 0.71
TPM1-219ENST00000559397 PASKQ96RG2 1323 aa19.48■□□□□ 0.71
TPM1-219ENST00000559397 NF2P35240 595 aa19.48■□□□□ 0.71
TPM1-219ENST00000559397 TRPM7Q96QT4 1865 aa19.48■□□□□ 0.71
TPM1-219ENST00000559397 PAPPA2Q9BXP8 1791 aa19.48■□□□□ 0.71
TPM1-219ENST00000559397 ANKRD1Q15327 319 aa19.47■□□□□ 0.71
TPM1-219ENST00000559397 NOL8Q76FK4 1167 aaKnown RBP19.47■□□□□ 0.71
TPM1-219ENST00000559397 KLRG1Q96E93 195 aa19.47■□□□□ 0.71
TPM1-219ENST00000559397 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
TPM1-219ENST00000559397 CNNM2Q9H8M5 875 aa19.47■□□□□ 0.71
TPM1-219ENST00000559397 PPP1R12BO60237 982 aaPredicted RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 PRKG1Q13976 671 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 MAP3K11Q16584 847 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 CERKLQ49MI3 558 aaPredicted RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 RRP12Q5JTH9 1297 aaKnown RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 ZNF444Q8N0Y2 327 aaPredicted RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 NCOA7Q8NI08 942 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 KRT23Q9C075 422 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 B4E1Z4 1266 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 CELF2O95319 508 aaKnown RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 NT5C2P49902 561 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 EXOSC10Q01780 885 aaKnown RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 CST9Q5W186 159 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 MB21D2Q8IYB1 491 aaPredicted RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.46■□□□□ 0.71
TPM1-219ENST00000559397 ZNF408Q9H9D4 720 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 SH2B1Q9NRF2 756 aaPredicted RBP19.46■□□□□ 0.71
TPM1-219ENST00000559397 TOMM22Q9NS69 142 aa19.46■□□□□ 0.71
TPM1-219ENST00000559397 GREB1LQ9C091 1923 aaPredicted RBP19.45■□□□□ 0.7
TPM1-219ENST00000559397 AKR1B1P15121 316 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 JAG1P78504 1218 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 FSTL1Q12841 308 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 TRDNQ13061 729 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 TOB2Q14106 344 aaPredicted RBP19.45■□□□□ 0.7
TPM1-219ENST00000559397 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 SHROOM1Q2M3G4 852 aaPredicted RBP19.45■□□□□ 0.7
TPM1-219ENST00000559397 FAM47AQ5JRC9 791 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 MOB2Q70IA6 237 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 DHX32Q7L7V1 743 aaKnown RBP19.45■□□□□ 0.7
TPM1-219ENST00000559397 ESR2Q92731 530 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 WRNIP1Q96S55 665 aa19.45■□□□□ 0.7
TPM1-219ENST00000559397 ANGEL1Q9UNK9 670 aaKnown RBP19.45■□□□□ 0.7
TPM1-219ENST00000559397 OTOFQ9HC10 1997 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 ATAD5Q96QE3 1844 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 RANBP6O60518 1105 aaKnown RBP19.44■□□□□ 0.7
TPM1-219ENST00000559397 GDF11O95390 407 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 INPP5BP32019 993 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 CAP2P40123 477 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 TFAP4Q01664 338 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 RAB3GAP1Q15042 981 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.44■□□□□ 0.7
TPM1-219ENST00000559397 ZSWIM5Q9P217 1185 aa19.44■□□□□ 0.7
TPM1-219ENST00000559397 CTNND1O60716 968 aaKnown RBP19.43■□□□□ 0.7
TPM1-219ENST00000559397 KDM4AO75164 1064 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 CYB5R4Q7L1T6 521 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
TPM1-219ENST00000559397 NEDD1Q8NHV4 660 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 TCEANC2Q96MN5 208 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 AGXT2Q9BYV1 514 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 TPCN1Q9ULQ1 816 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 PLIN4Q96Q06 1357 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 TSPY2A6NKD2 308 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 LARGE1O95461 756 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 IREB2P48200 963 aaKnown RBP19.43■□□□□ 0.7
TPM1-219ENST00000559397 FKBP1BP68106 108 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 MAP3K9P80192 1104 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 ABCB5Q2M3G0 1257 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 ARMC9Q7Z3E5 817 aa19.43■□□□□ 0.7
TPM1-219ENST00000559397 FBXL16Q8N461 479 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms