RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ATP8B2P98198 1209 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 FAM110CQ1W6H9 321 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 TEX11Q8IYF3 940 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 ZNF280CQ8ND82 737 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 NKX2-3Q8TAU0 364 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 DIS3LQ8TF46 1054 aaKnown RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 ASCC2Q9H1I8 757 aaPredicted RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 TXNRD2Q9NNW7 524 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 GPR108Q9NPR9 543 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 PIH1D3Q9NQM4 214 aaKnown RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 AATFQ9NY61 560 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP3-212ENST00000559276 TLR7Q9NYK1 1049 aaKnown RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 RAI14Q9P0K7 980 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 ISY1Q9ULR0 285 aaKnown RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 TRIOBPQ9H2D6 2365 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 COL6A3P12111 3177 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 MYH1P12882 1939 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 UQCRFS1P1P0C7P4 283 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 ZAP70P43403 619 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 UBXN2AP68543 259 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 GSTO1P78417 241 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 G3BP1Q13283 466 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP3-212ENST00000559276 SMCR8Q8TEV9 937 aaPredicted RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 TGFBRAP1Q8WUH2 860 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 DPF3Q92784 378 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 FRAT1Q92837 279 aaPredicted RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 EAF2Q96CJ1 260 aaPredicted RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 DEFB118Q96PH6 123 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 WDR18Q9BV38 432 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 C1orf115Q9H7X2 142 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 LRP2BPQ9P2M1 347 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 PI4KBQ9UBF8 816 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 MORF4L1Q9UBU8 362 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 HERC5Q9UII4 1024 aaKnown RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 DBNLQ9UJU6 430 aaKnown RBP7.12□□□□□ -1.27
USP3-212ENST00000559276 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
USP3-212ENST00000559276 DNAH12Q6ZR08 3092 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 SOX1O00570 391 aaPredicted RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 HOXA7P31268 230 aaPredicted RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 GCLCP48506 637 aaPredicted RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 BACE1P56817 501 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 MTMR2Q13614 643 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 Q3C1V9 767 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 GORABQ5T7V8 394 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 MAP3K21Q5TCX8 1036 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 NAA16Q6N069 864 aaPredicted RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 MAPKAPK5Q8IW41 473 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 TRIB2Q92519 343 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 USP6NLQ92738 828 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 PAWRQ96IZ0 340 aaKnown RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 TBC1D2Q9BYX2 928 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP3-212ENST00000559276 DHX36Q9H2U1 1008 aaKnown RBP7.11□□□□□ -1.27
USP3-212ENST00000559276 ANTXR1Q9H6X2 564 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 PNMA3Q9UL41 463 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 PALD1Q9ULE6 856 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 FRMPD3Q5JV73 1810 aa7.11□□□□□ -1.27
USP3-212ENST00000559276 RLFQ13129 1914 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 SURF6O75683 361 aaKnown RBP7.1□□□□□ -1.27
USP3-212ENST00000559276 CNMDO75829 334 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 GDF11O95390 407 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 TFRCP02786 760 aaKnown RBP7.1□□□□□ -1.27
USP3-212ENST00000559276 EVX2Q03828 476 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 C20orf194Q5TEA3 1177 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 ZKSCAN2Q63HK3 967 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 TATDN1Q6P1N9 297 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 FOXP4Q8IVH2 680 aaPredicted RBP7.1□□□□□ -1.27
USP3-212ENST00000559276 COA7Q96BR5 231 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 HTATIP2Q9BUP3 242 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
USP3-212ENST00000559276 EMILIN3Q9NT22 766 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 SAP30BPQ9UHR5 308 aaKnown RBP7.1□□□□□ -1.27
USP3-212ENST00000559276 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
USP3-212ENST00000559276 PFASO15067 1338 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 RPTORQ8N122 1335 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 C19orf81C9J6K1 198 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 BAG3O95817 575 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 IGHA2P01877 340 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 HMGCRP04035 888 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 ASNSP08243 561 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 PTMSP20962 102 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 GUCY1A2P33402 732 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 HERVK_113P62684 666 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 CCDC158Q5M9N0 1113 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 MORN1Q5T089 497 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 CEP85Q6P2H3 762 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 MIGA1Q8NAN2 632 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 UBE2Q2Q8WVN8 375 aa7.09□□□□□ -1.27
USP3-212ENST00000559276 RIOK1Q9BRS2 568 aaKnown RBP7.09□□□□□ -1.27
USP3-212ENST00000559276 PORCNQ9H237 461 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms