RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SMCR8Q8TEV9 937 aaPredicted RBP21.24■□□□□ 0.99
SMAD3-210ENST00000559092 TRIM47Q96LD4 638 aa21.24■□□□□ 0.99
SMAD3-210ENST00000559092 DCP1AQ9NPI6 582 aaPredicted RBP21.24■□□□□ 0.99
SMAD3-210ENST00000559092 USP17L10C9JJH3 530 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 GDF11O95390 407 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 FMNL1O95466 1100 aaPredicted RBP21.23■□□□□ 0.99
SMAD3-210ENST00000559092 OSBPP22059 807 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 GABPAQ06546 454 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 ARMT1Q9H993 441 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 TMOD4Q9NZQ9 345 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 SRRDQ9UH36 339 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 PTCH2Q9Y6C5 1203 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 DOCK1Q14185 1865 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
SMAD3-210ENST00000559092 MBD4O95243 580 aa21.22■□□□□ 0.99
SMAD3-210ENST00000559092 GH2P01242 217 aa21.22■□□□□ 0.99
SMAD3-210ENST00000559092 HOXA7P31268 230 aaPredicted RBP21.22■□□□□ 0.99
SMAD3-210ENST00000559092 GCLCP48506 637 aaPredicted RBP21.22■□□□□ 0.99
SMAD3-210ENST00000559092 FCGRTP55899 365 aa21.22■□□□□ 0.99
SMAD3-210ENST00000559092 HDAC1Q13547 482 aaPredicted RBP21.22■□□□□ 0.99
SMAD3-210ENST00000559092 MTMR2Q13614 643 aa21.22■□□□□ 0.99
SMAD3-210ENST00000559092 KBTBD3Q8NAB2 608 aa21.22■□□□□ 0.99
SMAD3-210ENST00000559092 SDR42E1Q8WUS8 393 aa21.22■□□□□ 0.99
SMAD3-210ENST00000559092 ERC2O15083 957 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 CTGFP29279 349 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 SHMT1P34896 483 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 SLC9C1Q4G0N8 1177 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
SMAD3-210ENST00000559092 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
SMAD3-210ENST00000559092 ZFYP08048 801 aaPredicted RBP21.2■□□□□ 0.98
SMAD3-210ENST00000559092 SHROOM1Q2M3G4 852 aaPredicted RBP21.2■□□□□ 0.98
SMAD3-210ENST00000559092 LRRFIP1Q32MZ4 808 aaKnown RBP21.2■□□□□ 0.98
SMAD3-210ENST00000559092 SLFNL1Q499Z3 407 aa21.2■□□□□ 0.98
SMAD3-210ENST00000559092 GCC1Q96CN9 775 aa21.2■□□□□ 0.98
SMAD3-210ENST00000559092 ZNF333Q96JL9 665 aa21.2■□□□□ 0.98
SMAD3-210ENST00000559092 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
SMAD3-210ENST00000559092 PRKAB2O43741 272 aa21.19■□□□□ 0.98
SMAD3-210ENST00000559092 GLRX3O76003 335 aaKnown RBP21.19■□□□□ 0.98
SMAD3-210ENST00000559092 FAM110CQ1W6H9 321 aa21.19■□□□□ 0.98
SMAD3-210ENST00000559092 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
SMAD3-210ENST00000559092 AMOTL1Q8IY63 956 aa21.19■□□□□ 0.98
SMAD3-210ENST00000559092 ASCC2Q9H1I8 757 aaPredicted RBP21.19■□□□□ 0.98
SMAD3-210ENST00000559092 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
SMAD3-210ENST00000559092 FOCADQ5VW36 1801 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 USP14P54578 494 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 RAB3GAP1Q15042 981 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 TSHZ3Q63HK5 1081 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 ANKRD13CQ8N6S4 541 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 PUS7LQ9H0K6 701 aaKnown RBP21.18■□□□□ 0.98
SMAD3-210ENST00000559092 SLC4A4Q9Y6R1 1079 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
SMAD3-210ENST00000559092 RNF113AO15541 343 aaKnown RBP21.17■□□□□ 0.98
SMAD3-210ENST00000559092 CHGBP05060 677 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 IRX3P78415 501 aaPredicted RBP21.17■□□□□ 0.98
SMAD3-210ENST00000559092 C12orf60Q5U649 245 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 RAET1EQ8TD07 263 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 C12orf42Q96LP6 360 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 TMEM106CQ9BVX2 250 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 KIAA1683Q9H0B3 1180 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 EMILIN3Q9NT22 766 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 PHIPQ8WWQ0 1821 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 CENPFP49454 3210 aa21.17■□□□□ 0.98
SMAD3-210ENST00000559092 MYPNQ86TC9 1320 aa21.16■□□□□ 0.98
SMAD3-210ENST00000559092 ANKRD45Q5TZF3 282 aa21.16■□□□□ 0.98
SMAD3-210ENST00000559092 GIMAP6Q6P9H5 292 aa21.16■□□□□ 0.98
SMAD3-210ENST00000559092 PI4K2BQ8TCG2 481 aa21.16■□□□□ 0.98
SMAD3-210ENST00000559092 APPBP2Q92624 585 aa21.16■□□□□ 0.98
SMAD3-210ENST00000559092 STRBPQ96SI9 672 aaKnown RBP21.16■□□□□ 0.98
SMAD3-210ENST00000559092 USP17L12C9JPN9 530 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 USP17L21D6R901 530 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 TNPO2O14787 897 aaKnown RBP21.15■□□□□ 0.98
SMAD3-210ENST00000559092 CYP2D6P10635 497 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 MX1P20591 662 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 GTF3C2Q8WUA4 911 aaPredicted RBP21.15■□□□□ 0.98
SMAD3-210ENST00000559092 CCDC17Q96LX7 622 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 P2RX7Q99572 595 aaKnown RBP21.15■□□□□ 0.98
SMAD3-210ENST00000559092 FEZ1Q99689 392 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 MORF4L1Q9UBU8 362 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
SMAD3-210ENST00000559092 ECM2O94769 699 aaPredicted RBP21.14■□□□□ 0.97
SMAD3-210ENST00000559092 GRK4P32298 578 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 GUCY1A2P33402 732 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 PRKCZQ05513 592 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 TMEM179Q6ZVK1 233 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 OTUD7AQ8TE49 926 aaPredicted RBP21.14■□□□□ 0.97
SMAD3-210ENST00000559092 SH3TC2Q8TF17 1288 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 OSBP2Q969R2 916 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 COA7Q96BR5 231 aa21.14■□□□□ 0.97
SMAD3-210ENST00000559092 SALL3Q9BXA9 1300 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 POTEFA5A3E0 1075 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 GNAT2P19087 354 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 HERVK_113P62684 666 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 EVX2Q03828 476 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 IRF5Q13568 498 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 SEPT2Q15019 361 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 ACER1Q8TDN7 264 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
SMAD3-210ENST00000559092 ARPP21Q9UBL0 812 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms