RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 NT5C1AQ9BXI3 368 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 ATXN3LQ9H3M9 355 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 TLR6Q9Y2C9 796 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 F6X3S4 739 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
CASC4-206ENST00000558847 RING1Q06587 406 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 OGFOD2Q6N063 350 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 LRFN4Q6PJG9 635 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 SEZ6L2Q6UXD5 910 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 GATA6Q92908 595 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 MIR1-1HGQ9H1L0 117 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 ADAMTS1Q9UHI8 967 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
CASC4-206ENST00000558847 DYNC1LI2O43237 492 aaPredicted RBP6.74□□□□□ -1.33
CASC4-206ENST00000558847 STK10O94804 968 aaKnown RBP6.74□□□□□ -1.33
CASC4-206ENST00000558847 GTF2F1P35269 517 aaKnown RBP eCLIP6.74□□□□□ -1.33
CASC4-206ENST00000558847 CDK8P49336 464 aa6.74□□□□□ -1.33
CASC4-206ENST00000558847 CAMK2GQ13555 558 aaPredicted RBP6.74□□□□□ -1.33
CASC4-206ENST00000558847 TTLL4Q14679 1199 aa6.74□□□□□ -1.33
CASC4-206ENST00000558847 NFXL1Q6ZNB6 911 aa6.74□□□□□ -1.33
CASC4-206ENST00000558847 CBLL1Q75N03 491 aa6.74□□□□□ -1.33
CASC4-206ENST00000558847 PAK6Q9NQU5 681 aaPredicted RBP6.74□□□□□ -1.33
CASC4-206ENST00000558847 SLC5A6Q9Y289 635 aa6.74□□□□□ -1.33
CASC4-206ENST00000558847 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 DCDC2CA8MYV0 355 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 PF4P02776 101 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
CASC4-206ENST00000558847 FGRP09769 529 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 HCLS1P14317 486 aaPredicted RBP6.73□□□□□ -1.33
CASC4-206ENST00000558847 JUNBP17275 347 aaPredicted RBP6.73□□□□□ -1.33
CASC4-206ENST00000558847 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 INPP5AQ14642 412 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 PLCL1Q15111 1095 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 CYP27C1Q4G0S4 372 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 ZBTB37Q5TC79 503 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 UBE3DQ7Z6J8 389 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 RNF214Q8ND24 703 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 ISL2Q96A47 359 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 PLPPR2Q96GM1 343 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 PIDD1Q9HB75 910 aa6.73□□□□□ -1.33
CASC4-206ENST00000558847 GREM1O60565 184 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 GARTP22102 1010 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 CWF19L2Q2TBE0 894 aaKnown RBP6.72□□□□□ -1.33
CASC4-206ENST00000558847 PPM1JQ5JR12 505 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 WIPI1Q5MNZ9 446 aaPredicted RBP6.72□□□□□ -1.33
CASC4-206ENST00000558847 FBXL19Q6PCT2 694 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 FAM196AQ6ZSG2 479 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 CYFIP1Q7L576 1253 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 GOLM1Q8NBJ4 401 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 LRRC3Q9BY71 257 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 C1GALT1Q9NS00 363 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 CSADQ9Y600 493 aa6.72□□□□□ -1.33
CASC4-206ENST00000558847 BPNT1O95861 308 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 CANXP27824 592 aaKnown RBP6.71□□□□□ -1.34
CASC4-206ENST00000558847 SOX9P48436 509 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 RBL2Q08999 1139 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 C12orf40Q86WS4 652 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 CKAP2LQ8IYA6 745 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 SMYD4Q8IYR2 804 aaPredicted RBP6.71□□□□□ -1.34
CASC4-206ENST00000558847 GATAD2BQ8WXI9 593 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 NKD1Q969G9 470 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 EAF1Q96JC9 268 aaPredicted RBP6.71□□□□□ -1.34
CASC4-206ENST00000558847 NBPF4Q96M43 638 aa6.71□□□□□ -1.34
CASC4-206ENST00000558847 FAM221AA4D161 298 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 GFRA2O00451 464 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 FANCGO15287 622 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 NASPP49321 788 aaPredicted RBP6.7□□□□□ -1.34
CASC4-206ENST00000558847 FAM160A1Q05DH4 1040 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 MPP2Q14168 576 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 BNC2Q6ZN30 1099 aaPredicted RBP6.7□□□□□ -1.34
CASC4-206ENST00000558847 ZNF574Q6ZN55 896 aaPredicted RBP6.7□□□□□ -1.34
CASC4-206ENST00000558847 ARHGAP27Q6ZUM4 889 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 STK11IPQ8N1F8 1099 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 BCL7CQ8WUZ0 217 aaPredicted RBP6.7□□□□□ -1.34
CASC4-206ENST00000558847 DHX38Q92620 1227 aaKnown RBP6.7□□□□□ -1.34
CASC4-206ENST00000558847 ELMO3Q96BJ8 720 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 EFR3BQ9Y2G0 817 aa6.7□□□□□ -1.34
CASC4-206ENST00000558847 LOC105371045A0A1W2PR82 267 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 BIN1O00499 593 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 CILPO75339 1184 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 F13A1P00488 732 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 C8AP07357 584 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 FAM87AP0C7U9 286 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 IMPDH2P12268 514 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 ITGB5P18084 799 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 ZNF165P49910 485 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 CDK5R2Q13319 367 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 HDXQ7Z353 690 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 SLITRK4Q8IW52 837 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 CPLX3Q8WVH0 158 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 SNCAIPQ9Y6H5 919 aa6.69□□□□□ -1.34
CASC4-206ENST00000558847 PRAMEF27A3QJZ7 478 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 RNGTTO60942 597 aaKnown RBP6.68□□□□□ -1.34
CASC4-206ENST00000558847 RPL6Q02878 288 aaKnown RBP6.68□□□□□ -1.34
CASC4-206ENST00000558847 BNIP3Q12983 259 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 ZNF792Q3KQV3 632 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 NOP9Q86U38 636 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms