RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 LSG1Q9H089 658 aaKnown RBP20.75■□□□□ 0.91
TPM1-214ENST00000558544 PICK1Q9NRD5 415 aa20.75■□□□□ 0.91
TPM1-214ENST00000558544 FAM155AB1AL88 458 aaPredicted RBP20.74■□□□□ 0.91
TPM1-214ENST00000558544 SLC3A2P08195 630 aaKnown RBP20.74■□□□□ 0.91
TPM1-214ENST00000558544 VEGFBP49765 207 aa20.74■□□□□ 0.91
TPM1-214ENST00000558544 JAG1P78504 1218 aa20.74■□□□□ 0.91
TPM1-214ENST00000558544 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
TPM1-214ENST00000558544 OTUD5Q96G74 571 aa20.74■□□□□ 0.91
TPM1-214ENST00000558544 ANAPC4Q9UJX5 808 aa20.74■□□□□ 0.91
TPM1-214ENST00000558544 TAOK2Q9UL54 1235 aa20.74■□□□□ 0.91
TPM1-214ENST00000558544 MYH4Q9Y623 1939 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 SPDYE5A6NIY4 337 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 PRDM1O75626 825 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 GJA5P36382 358 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 ECE1P42892 770 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 ABCB5Q2M3G0 1257 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 ERO1BQ86YB8 467 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 CCDC102AQ96A19 550 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 MKNK2Q9HBH9 465 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 CTNNA3Q9UI47 895 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 ZBTB21Q9ULJ3 1066 aa20.73■□□□□ 0.91
TPM1-214ENST00000558544 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
TPM1-214ENST00000558544 WDR33Q9C0J8 1336 aaKnown RBP20.73■□□□□ 0.91
TPM1-214ENST00000558544 MPHOSPH10O00566 681 aaKnown RBP20.72■□□□□ 0.91
TPM1-214ENST00000558544 ZNF213O14771 459 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 GH2P01242 217 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 PTPRAP18433 802 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 PDE4BQ07343 736 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 IMMTQ16891 758 aaKnown RBP20.72■□□□□ 0.91
TPM1-214ENST00000558544 SPRYD7Q5W111 196 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 TBC1D10CQ8IV04 446 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 MAP4K1Q92918 833 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 INCENPQ9NQS7 918 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 RBM8AQ9Y5S9 174 aaKnown RBP20.72■□□□□ 0.91
TPM1-214ENST00000558544 TACC3Q9Y6A5 838 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 PCNTO95613 3336 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 AOC2O75106 756 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 ASNSP08243 561 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 AKR1B1P15121 316 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 RASA1P20936 1047 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 ZNF287Q9HBT7 754 aa20.72■□□□□ 0.91
TPM1-214ENST00000558544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.72■□□□□ 0.91
TPM1-214ENST00000558544 ZBTB48P10074 688 aaPredicted RBP20.71■□□□□ 0.91
TPM1-214ENST00000558544 PPATQ06203 517 aa20.71■□□□□ 0.91
TPM1-214ENST00000558544 PPIL2Q13356 520 aa20.71■□□□□ 0.91
TPM1-214ENST00000558544 CABP5Q9NP86 173 aa20.71■□□□□ 0.91
TPM1-214ENST00000558544 ZHX2Q9Y6X8 837 aa20.71■□□□□ 0.91
TPM1-214ENST00000558544 RAB3GAP1Q15042 981 aa20.7■□□□□ 0.9
TPM1-214ENST00000558544 DNAJC5GQ8N7S2 189 aa20.7■□□□□ 0.9
TPM1-214ENST00000558544 CCDC17Q96LX7 622 aa20.7■□□□□ 0.9
TPM1-214ENST00000558544 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
TPM1-214ENST00000558544 TOMM22Q9NS69 142 aa20.7■□□□□ 0.9
TPM1-214ENST00000558544 GINM1Q9NU53 330 aa20.7■□□□□ 0.9
TPM1-214ENST00000558544 LOC285556D6RIA3 1793 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 IRF6O14896 467 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 CYP21A2P08686 494 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 NOGQ13253 232 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 ZNF444Q8N0Y2 327 aaPredicted RBP20.69■□□□□ 0.9
TPM1-214ENST00000558544 STAG1Q8WVM7 1258 aa20.69■□□□□ 0.9
TPM1-214ENST00000558544 NEDD4P46934 1319 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 FGRP09769 529 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 GUCY1A2P33402 732 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 SEPT2Q15019 361 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 RRP12Q5JTH9 1297 aaKnown RBP20.68■□□□□ 0.9
TPM1-214ENST00000558544 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 TMEM179Q6ZVK1 233 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 CLEC10AQ8IUN9 316 aa20.68■□□□□ 0.9
TPM1-214ENST00000558544 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
TPM1-214ENST00000558544 ORC4O43929 436 aa20.67■□□□□ 0.9
TPM1-214ENST00000558544 REC8O95072 547 aa20.67■□□□□ 0.9
TPM1-214ENST00000558544 KIF23Q02241 960 aaPredicted RBP20.67■□□□□ 0.9
TPM1-214ENST00000558544 FAM47AQ5JRC9 791 aa20.67■□□□□ 0.9
TPM1-214ENST00000558544 AS3MTQ9HBK9 375 aa20.67■□□□□ 0.9
TPM1-214ENST00000558544 AFG3L2Q9Y4W6 797 aa20.67■□□□□ 0.9
TPM1-214ENST00000558544 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
TPM1-214ENST00000558544 TRIM75PA6NK02 468 aa20.66■□□□□ 0.9
TPM1-214ENST00000558544 RANBP6O60518 1105 aaKnown RBP20.66■□□□□ 0.9
TPM1-214ENST00000558544 TSPY3P0CV98 308 aa20.66■□□□□ 0.9
TPM1-214ENST00000558544 TSPY8P0CW00 308 aa20.66■□□□□ 0.9
TPM1-214ENST00000558544 PLIN4Q96Q06 1357 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 TSPY2A6NKD2 308 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 SLC27A2O14975 620 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 PCP11498 1178 aaKnown RBP20.65■□□□□ 0.9
TPM1-214ENST00000558544 TFAP4Q01664 338 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 SPP2Q13103 211 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 NECTIN1Q15223 517 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 CREB3L3Q68CJ9 461 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.65■□□□□ 0.9
TPM1-214ENST00000558544 TBC1D2Q9BYX2 928 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 KCNH4Q9UQ05 1017 aa20.65■□□□□ 0.9
TPM1-214ENST00000558544 MAP2K2P36507 400 aa20.64■□□□□ 0.89
TPM1-214ENST00000558544 GTF2A2P52657 109 aa20.64■□□□□ 0.89
TPM1-214ENST00000558544 ICA1Q05084 483 aa20.64■□□□□ 0.89
TPM1-214ENST00000558544 SNAPC2Q13487 334 aa20.64■□□□□ 0.89
TPM1-214ENST00000558544 NKX2-3Q8TAU0 364 aa20.64■□□□□ 0.89
TPM1-214ENST00000558544 MS4A4AQ96JQ5 239 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms