RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 DDR1Q08345 913 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 SAFBQ15424 915 aaKnown RBP eCLIP12.19□□□□□ -0.46
TPM1-210ENST00000558264 NOM1Q5C9Z4 860 aaKnown RBP12.19□□□□□ -0.46
TPM1-210ENST00000558264 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 CABP5Q9NP86 173 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 PCDHB6Q9Y5E3 794 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 XDHP47989 1333 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 CCDC196A0A1B0GTZ2 297 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 ZNF75DP51815 510 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 AKAP17AQ02040 695 aaKnown RBP12.19□□□□□ -0.46
TPM1-210ENST00000558264 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
TPM1-210ENST00000558264 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
TPM1-210ENST00000558264 TGFBRAP1Q8WUH2 860 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 WASF1Q92558 559 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
TPM1-210ENST00000558264 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
TPM1-210ENST00000558264 VEGFAP15692 232 aaPredicted RBP12.18□□□□□ -0.46
TPM1-210ENST00000558264 CMA1P23946 247 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 SYKP43405 635 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 ST5P78524 1137 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 LRMPQ12912 555 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 CCDC186Q7Z3E2 898 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 MAPKAPK5Q8IW41 473 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
TPM1-210ENST00000558264 TROAPQ12815 778 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 PNOCQ13519 176 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
TPM1-210ENST00000558264 PKN1Q16512 942 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 ANO10Q9NW15 660 aa12.18□□□□□ -0.46
TPM1-210ENST00000558264 FOXN1O15353 648 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
TPM1-210ENST00000558264 KRT27Q7Z3Y8 459 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 ATP8A2Q9NTI2 1148 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 LEMD3Q9Y2U8 911 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 NID2Q14112 1375 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 USP17L3A6NCW0 530 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 USP17L4A6NCW7 530 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 C6orf229H3BNL8 230 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 WNT7AO00755 349 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 FUT2Q10981 343 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.17□□□□□ -0.46
TPM1-210ENST00000558264 RASGRP2Q7LDG7 609 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 USP17L1Q7RTZ2 530 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 CEP57L1Q8IYX8 460 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 PROM2Q8N271 834 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
TPM1-210ENST00000558264 PDILTQ8N807 584 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 ARPP21Q9UBL0 812 aaPredicted RBP12.17□□□□□ -0.46
TPM1-210ENST00000558264 CLIP2Q9UDT6 1046 aa12.17□□□□□ -0.46
TPM1-210ENST00000558264 ADAMTS3O15072 1205 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 PLCD1P51178 756 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 TFAP4Q01664 338 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 LONRF3Q496Y0 759 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 SPTY2D1Q68D10 685 aaPredicted RBP12.16□□□□□ -0.46
TPM1-210ENST00000558264 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 PPP6R2O75170 966 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 USP49Q70CQ1 688 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
TPM1-210ENST00000558264 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
TPM1-210ENST00000558264 PDS5AQ29RF7 1337 aaKnown RBP12.16□□□□□ -0.46
TPM1-210ENST00000558264 F8W031 263 aaPredicted RBP12.15□□□□□ -0.46
TPM1-210ENST00000558264 FGRP09769 529 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 PDE4BQ07343 736 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 GRAMD1CQ8IYS0 662 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 CTCFLQ8NI51 663 aaPredicted RBP12.15□□□□□ -0.46
TPM1-210ENST00000558264 POLRMTO00411 1230 aaKnown RBP12.15□□□□□ -0.46
TPM1-210ENST00000558264 ORC4O43929 436 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 BTDP43251 543 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.46
TPM1-210ENST00000558264 CRY2Q49AN0 593 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 RESP18Q5W5W9 173 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 TMTC3Q6ZXV5 915 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 KRI1Q8N9T8 703 aaKnown RBP12.15□□□□□ -0.46
TPM1-210ENST00000558264 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
TPM1-210ENST00000558264 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
TPM1-210ENST00000558264 MKNK2Q9HBH9 465 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 IL17RBQ9NRM6 502 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 KCNH3Q9ULD8 1083 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 HPSEQ9Y251 543 aa12.15□□□□□ -0.46
TPM1-210ENST00000558264 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.47
TPM1-210ENST00000558264 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 C12orf60Q5U649 245 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 CUTAO60888 179 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 MSL1Q68DK7 614 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms