RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MAP7Q14244 749 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 TXNDC11Q6PKC3 985 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.68□□□□□ -1.98
HIF1A-212ENST00000557538 JARID2Q92833 1246 aaPredicted RBP2.68□□□□□ -1.98
HIF1A-212ENST00000557538 GATA6Q92908 595 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 ISL2Q96A47 359 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 ELMO3Q96BJ8 720 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 SGSM3Q96HU1 749 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 DCAF5Q96JK2 942 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 LNPKQ9C0E8 428 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 REV1Q9UBZ9 1251 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 TLDC2A0PJX2 215 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 KRBA1A5PL33 1030 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF157P51786 506 aaPredicted RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 NLRP12P59046 1061 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 PDE3AQ14432 1141 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 FXNQ16595 210 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 BBS9Q3SYG4 887 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 DPH6Q7L8W6 267 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF513Q8N8E2 541 aaPredicted RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 CYB5D2Q8WUJ1 264 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 USP26Q9BXU7 913 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 TBX22Q9Y458 520 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF865P0CJ78 1059 aaPredicted RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 CDK8P49336 464 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 RNF4P78317 190 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 RASA3Q14644 834 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 DDR2Q16832 855 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 OVOS1Q6IE37 1185 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 SYNPOQ8N3V7 929 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 DHRS1Q96LJ7 313 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 UBL7Q96S82 380 aaPredicted RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 C1GALT1Q9NS00 363 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 ACTR10Q9NZ32 417 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 SMAD7O15105 426 aaKnown RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 DNAJA2O60884 412 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 SSBP05455 408 aaKnown RBP eCLIP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 KIR3DL1P43629 444 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 ANKS3Q6ZW76 656 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 ENOX1Q8TC92 643 aaKnown RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 RNF141Q8WVD5 230 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 CCDC74BQ96LY2 380 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 SUCOQ9UBS9 1254 aaKnown RBP2.67□□□□□ -1.98
HIF1A-212ENST00000557538 MAPK8IP1Q9UQF2 711 aa2.67□□□□□ -1.98
HIF1A-212ENST00000557538 GSC2O15499 205 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 FDX2Q6P4F2 183 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 UNC5AQ6ZN44 842 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 FAM169BQ8N8A8 192 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 KLHL6Q8WZ60 621 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 BRINP2Q9C0B6 783 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 RAD18Q9NS91 495 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 FAM105AQ9NUU6 356 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 CCDC163A0A0D9SF12 145 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 UBOX5O94941 541 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 ITGB2P05107 769 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 DNAJA1P31689 397 aaKnown RBP2.66□□□□□ -1.98
HIF1A-212ENST00000557538 PREPP48147 710 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 CCDC144BQ3MJ40 725 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 SMYD4Q8IYR2 804 aaPredicted RBP2.66□□□□□ -1.98
HIF1A-212ENST00000557538 GIMAP7Q8NHV1 300 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 DHX38Q92620 1227 aaKnown RBP2.66□□□□□ -1.98
HIF1A-212ENST00000557538 ACSBG1Q96GR2 724 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 CRBNQ96SW2 442 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 FBRSQ9HAH7 460 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 DCDC2CA8MYV0 355 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 PGRP06401 933 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 NAT2P11245 290 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 ETV3P41162 512 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 ASPAP45381 313 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 OGFOD3Q6PK18 319 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 TTC6Q86TZ1 520 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 CD163Q86VB7 1156 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 PIWIL2Q8TC59 973 aaKnown RBP2.66□□□□□ -1.98
HIF1A-212ENST00000557538 RCC1LQ96I51 464 aaKnown RBP2.66□□□□□ -1.98
HIF1A-212ENST00000557538 MEGF10Q96KG7 1140 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 FERD3LQ96RJ6 166 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 SLC9A7Q96T83 725 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 GPR62Q9BZJ7 368 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 SUSD2Q9UGT4 822 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 PPT2Q9UMR5 302 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 RAXQ9Y2V3 346 aa2.66□□□□□ -1.98
HIF1A-212ENST00000557538 TLR3O15455 904 aaKnown RBP2.65□□□□□ -1.98
HIF1A-212ENST00000557538 EOMESO95936 686 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 SRFP11831 508 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 PLCG1P19174 1290 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 TTLL4Q14679 1199 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 PPM1JQ5JR12 505 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 SEMA6CQ9H3T2 930 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF281Q9Y2X9 895 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 LTBP3Q9NS15 1303 aa2.65□□□□□ -1.98
HIF1A-212ENST00000557538 DHX15O43143 795 aaKnown RBP2.65□□□□□ -1.99
HIF1A-212ENST00000557538 RFPL3O75679 317 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 CDPF1Q6NVV7 123 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 PRR23CQ6ZRP0 262 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 C12orf40Q86WS4 652 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 TNKS2Q9H2K2 1166 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 CDK11AQ9UQ88 783 aaPredicted RBP2.65□□□□□ -1.99
HIF1A-212ENST00000557538 DNAJC25-GNG10A0A024R161 153 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 CHURC1-FNTBB4DL54 471 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms