RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 GINM1Q9NU53 330 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 GDF11O95390 407 aa17.23■□□□□ 0.35
SNX6-210ENST00000557341 GCLCP48506 637 aaPredicted RBP17.23■□□□□ 0.35
SNX6-210ENST00000557341 UBXN2AP68543 259 aa17.23■□□□□ 0.35
SNX6-210ENST00000557341 MTMR2Q13614 643 aa17.23■□□□□ 0.35
SNX6-210ENST00000557341 ZBTB21Q9ULJ3 1066 aa17.23■□□□□ 0.35
SNX6-210ENST00000557341 GABRQQ9UN88 632 aa17.23■□□□□ 0.35
SNX6-210ENST00000557341 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
SNX6-210ENST00000557341 BACE1P56817 501 aa17.22■□□□□ 0.35
SNX6-210ENST00000557341 MTFR1Q15390 333 aa17.22■□□□□ 0.35
SNX6-210ENST00000557341 SIRT2Q8IXJ6 389 aa17.22■□□□□ 0.35
SNX6-210ENST00000557341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX6-210ENST00000557341 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
SNX6-210ENST00000557341 BIN2Q9UBW5 565 aaPredicted RBP17.22■□□□□ 0.35
SNX6-210ENST00000557341 CEP290O15078 2479 aa17.22■□□□□ 0.35
SNX6-210ENST00000557341 RAB11FIP3O75154 756 aa17.21■□□□□ 0.35
SNX6-210ENST00000557341 COA7Q96BR5 231 aa17.21■□□□□ 0.35
SNX6-210ENST00000557341 ASCC2Q9H1I8 757 aaPredicted RBP17.21■□□□□ 0.35
SNX6-210ENST00000557341 EHD4Q9H223 541 aa17.21■□□□□ 0.35
SNX6-210ENST00000557341 SERPINB13Q9UIV8 391 aa17.21■□□□□ 0.35
SNX6-210ENST00000557341 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
SNX6-210ENST00000557341 FRMPD3Q5JV73 1810 aa17.21■□□□□ 0.35
SNX6-210ENST00000557341 C19orf81C9J6K1 198 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 CCL5P13501 91 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 FLT3LGP49771 235 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
SNX6-210ENST00000557341 JAG1P78504 1218 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 IRF5Q13568 498 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
SNX6-210ENST00000557341 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 GCC1Q96CN9 775 aa17.2■□□□□ 0.34
SNX6-210ENST00000557341 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
SNX6-210ENST00000557341 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
SNX6-210ENST00000557341 MAGEB6P1A0A0J9YX57 407 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 GOLIM4O00461 696 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 ADCY3O60266 1144 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 PDE6AP16499 860 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 SLC9C2Q5TAH2 1124 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 PXYLP1Q8TE99 480 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 SHISA4Q96DD7 197 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 RNF208Q9H0X6 261 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 ALPK3Q96L96 1907 aa17.19■□□□□ 0.34
SNX6-210ENST00000557341 A0A0G2JMZ2 1700 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 GH2P01242 217 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 GJB1P08034 283 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 ELNP15502 786 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
SNX6-210ENST00000557341 GJA8P48165 433 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 PDE3AQ14432 1141 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
SNX6-210ENST00000557341 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
SNX6-210ENST00000557341 INHAP05111 366 aa17.17■□□□□ 0.34
SNX6-210ENST00000557341 FEZ1Q99689 392 aa17.17■□□□□ 0.34
SNX6-210ENST00000557341 MORF4L1Q9UBU8 362 aa17.17■□□□□ 0.34
SNX6-210ENST00000557341 TAOK2Q9UL54 1235 aa17.17■□□□□ 0.34
SNX6-210ENST00000557341 HERVK_113P62684 666 aa17.16■□□□□ 0.34
SNX6-210ENST00000557341 CERKLQ49MI3 558 aaPredicted RBP17.16■□□□□ 0.34
SNX6-210ENST00000557341 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
SNX6-210ENST00000557341 USP17L2Q6R6M4 530 aa17.16■□□□□ 0.34
SNX6-210ENST00000557341 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
SNX6-210ENST00000557341 RLFQ13129 1914 aa17.15■□□□□ 0.34
SNX6-210ENST00000557341 TCRBV5S4A2TA0A5A2 114 aa17.15■□□□□ 0.34
SNX6-210ENST00000557341 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
SNX6-210ENST00000557341 PLCD1P51178 756 aa17.15■□□□□ 0.34
SNX6-210ENST00000557341 ABCB5Q2M3G0 1257 aa17.15■□□□□ 0.34
SNX6-210ENST00000557341 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
SNX6-210ENST00000557341 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
SNX6-210ENST00000557341 LRRCC1Q9C099 1032 aa17.15■□□□□ 0.34
SNX6-210ENST00000557341 UNC93B1Q9H1C4 597 aa17.15■□□□□ 0.34
SNX6-210ENST00000557341 COL11A1P12107 1806 aaPredicted RBP17.14■□□□□ 0.34
SNX6-210ENST00000557341 ATP5JP18859 108 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 SHMT1P34896 483 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 U2AF1L4Q8WU68 220 aaKnown RBP17.14■□□□□ 0.33
SNX6-210ENST00000557341 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
SNX6-210ENST00000557341 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNX6-210ENST00000557341 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 MCM9Q9NXL9 1143 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 ZNF236Q9UL36 1845 aa17.14■□□□□ 0.33
SNX6-210ENST00000557341 ADD2P35612 726 aa17.13■□□□□ 0.33
SNX6-210ENST00000557341 USP14P54578 494 aa17.13■□□□□ 0.33
SNX6-210ENST00000557341 ZYXQ15942 572 aaKnown RBP17.13■□□□□ 0.33
SNX6-210ENST00000557341 GPRC5AQ8NFJ5 357 aa17.13■□□□□ 0.33
SNX6-210ENST00000557341 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
SNX6-210ENST00000557341 HAUS7Q99871 368 aa17.13■□□□□ 0.33
SNX6-210ENST00000557341 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
SNX6-210ENST00000557341 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
SNX6-210ENST00000557341 MYH4Q9Y623 1939 aa17.12■□□□□ 0.33
SNX6-210ENST00000557341 SGPL1O95470 568 aa17.12■□□□□ 0.33
SNX6-210ENST00000557341 HMGCRP04035 888 aa17.12■□□□□ 0.33
SNX6-210ENST00000557341 CAPN2P17655 700 aa17.12■□□□□ 0.33
SNX6-210ENST00000557341 GABPAQ06546 454 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms