RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 GPAT2Q6NUI2 795 aa27.35■■□□□ 1.97
PABPN1-207ENST00000556821 KBTBD3Q8NAB2 608 aa27.35■■□□□ 1.97
PABPN1-207ENST00000556821 EHD4Q9H223 541 aa27.35■■□□□ 1.97
PABPN1-207ENST00000556821 NBPF11Q86T75 865 aa27.34■■□□□ 1.97
PABPN1-207ENST00000556821 DOCK3Q8IZD9 2030 aa27.34■■□□□ 1.97
PABPN1-207ENST00000556821 ADGRA2Q96PE1 1338 aa27.34■■□□□ 1.97
PABPN1-207ENST00000556821 TRIOBPQ9H2D6 2365 aa27.34■■□□□ 1.97
PABPN1-207ENST00000556821 TRIM75PA6NK02 468 aa27.33■■□□□ 1.97
PABPN1-207ENST00000556821 DLL1O00548 723 aa27.33■■□□□ 1.97
PABPN1-207ENST00000556821 MX1P20591 662 aa27.33■■□□□ 1.97
PABPN1-207ENST00000556821 EVX2Q03828 476 aa27.33■■□□□ 1.97
PABPN1-207ENST00000556821 ANKRD45Q5TZF3 282 aa27.33■■□□□ 1.97
PABPN1-207ENST00000556821 DCP1AQ9NPI6 582 aaPredicted RBP27.33■■□□□ 1.97
PABPN1-207ENST00000556821 PDHXO00330 501 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 PRKAB2O43741 272 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 TLR2O60603 784 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 PLCD1P51178 756 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 SLC9C1Q4G0N8 1177 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 TRIM34Q9BYJ4 488 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 PUS7LQ9H0K6 701 aaKnown RBP27.32■■□□□ 1.96
PABPN1-207ENST00000556821 PRO3102Q9H379 93 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 RBM27Q9P2N5 1060 aaKnown RBP27.32■■□□□ 1.96
PABPN1-207ENST00000556821 SERPINB13Q9UIV8 391 aa27.32■■□□□ 1.96
PABPN1-207ENST00000556821 GDF11O95390 407 aa27.31■■□□□ 1.96
PABPN1-207ENST00000556821 ZSCAN25Q6NSZ9 544 aa27.31■■□□□ 1.96
PABPN1-207ENST00000556821 TATDN1Q6P1N9 297 aa27.31■■□□□ 1.96
PABPN1-207ENST00000556821 CHRDL2Q6WN34 429 aa27.31■■□□□ 1.96
PABPN1-207ENST00000556821 TTC6Q86TZ1 520 aa27.31■■□□□ 1.96
PABPN1-207ENST00000556821 SMC5Q8IY18 1101 aa27.31■■□□□ 1.96
PABPN1-207ENST00000556821 GREB1LQ9C091 1923 aaPredicted RBP27.3■■□□□ 1.96
PABPN1-207ENST00000556821 USP17L5A8MUK1 530 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 GLRX3O76003 335 aaKnown RBP27.3■■□□□ 1.96
PABPN1-207ENST00000556821 ASNSP08243 561 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 SPP2Q13103 211 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 GADL1Q6ZQY3 521 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 FASTKD5Q7L8L6 764 aaKnown RBP27.3■■□□□ 1.96
PABPN1-207ENST00000556821 ZNF280CQ8ND82 737 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 MCM9Q9NXL9 1143 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 ZBTB21Q9ULJ3 1066 aa27.3■■□□□ 1.96
PABPN1-207ENST00000556821 ERC2O15083 957 aa27.29■■□□□ 1.96
PABPN1-207ENST00000556821 IGHDP01880 384 aa27.29■■□□□ 1.96
PABPN1-207ENST00000556821 GABPAQ06546 454 aa27.29■■□□□ 1.96
PABPN1-207ENST00000556821 ARHGEF6Q15052 776 aa27.29■■□□□ 1.96
PABPN1-207ENST00000556821 TBC1D2Q9BYX2 928 aa27.29■■□□□ 1.96
PABPN1-207ENST00000556821 CYP2D6P10635 497 aa27.28■■□□□ 1.96
PABPN1-207ENST00000556821 SHMT1P34896 483 aa27.28■■□□□ 1.96
PABPN1-207ENST00000556821 POLR3DP05423 398 aaPredicted RBP27.27■■□□□ 1.96
PABPN1-207ENST00000556821 C17orf99Q6UX52 265 aa27.27■■□□□ 1.96
PABPN1-207ENST00000556821 APPBP2Q92624 585 aa27.27■■□□□ 1.96
PABPN1-207ENST00000556821 WDR18Q9BV38 432 aa27.27■■□□□ 1.96
PABPN1-207ENST00000556821 RWDD1Q9H446 243 aaPredicted RBP27.27■■□□□ 1.96
PABPN1-207ENST00000556821 ATP8A2Q9NTI2 1148 aa27.27■■□□□ 1.96
PABPN1-207ENST00000556821 GINM1Q9NU53 330 aa27.27■■□□□ 1.96
PABPN1-207ENST00000556821 PARP14Q460N5 1801 aa27.27■■□□□ 1.96
PABPN1-207ENST00000556821 RNF113AO15541 343 aaKnown RBP27.26■■□□□ 1.95
PABPN1-207ENST00000556821 CYP2C8P10632 490 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 TREML2Q5T2D2 321 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 OSBP2Q969R2 916 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 AS3MTQ9HBK9 375 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 ZBTB47Q9UFB7 747 aaPredicted RBP27.26■■□□□ 1.95
PABPN1-207ENST00000556821 STAP2Q9UGK3 403 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 CPA4Q9UI42 421 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 SLC45A1Q9Y2W3 748 aa27.26■■□□□ 1.95
PABPN1-207ENST00000556821 SMIM22K7EJ46 135 aa27.25■■□□□ 1.95
PABPN1-207ENST00000556821 HMGCS2P54868 508 aa27.25■■□□□ 1.95
PABPN1-207ENST00000556821 SH3D19Q5HYK7 790 aa27.25■■□□□ 1.95
PABPN1-207ENST00000556821 SLC17A8Q8NDX2 589 aa27.25■■□□□ 1.95
PABPN1-207ENST00000556821 PARK7Q99497 189 aaKnown RBP27.25■■□□□ 1.95
PABPN1-207ENST00000556821 LNPKQ9C0E8 428 aa27.25■■□□□ 1.95
PABPN1-207ENST00000556821 AGTPBP1Q9UPW5 1226 aa27.25■■□□□ 1.95
PABPN1-207ENST00000556821 GH2P01242 217 aa27.24■■□□□ 1.95
PABPN1-207ENST00000556821 ZFYP08048 801 aaPredicted RBP27.24■■□□□ 1.95
PABPN1-207ENST00000556821 PDE1AP54750 535 aa27.24■■□□□ 1.95
PABPN1-207ENST00000556821 IRX6P78412 446 aaPredicted RBP27.24■■□□□ 1.95
PABPN1-207ENST00000556821 UBE2Q1Q7Z7E8 422 aa27.24■■□□□ 1.95
PABPN1-207ENST00000556821 PROCA1Q8NCQ7 364 aaPredicted RBP27.24■■□□□ 1.95
PABPN1-207ENST00000556821 SHISA4Q96DD7 197 aa27.24■■□□□ 1.95
PABPN1-207ENST00000556821 STRBPQ96SI9 672 aaKnown RBP27.24■■□□□ 1.95
PABPN1-207ENST00000556821 SLC4A4Q9Y6R1 1079 aa27.24■■□□□ 1.95
PABPN1-207ENST00000556821 MYH4Q9Y623 1939 aa27.24■■□□□ 1.95
PABPN1-207ENST00000556821 CYP2D7A0A087X1C5 515 aa27.23■■□□□ 1.95
PABPN1-207ENST00000556821 MTMR2Q13614 643 aa27.23■■□□□ 1.95
PABPN1-207ENST00000556821 SLC44A5Q8NCS7 719 aa27.23■■□□□ 1.95
PABPN1-207ENST00000556821 SH3TC2Q8TF17 1288 aa27.23■■□□□ 1.95
PABPN1-207ENST00000556821 ARHGAP39Q9C0H5 1083 aa27.23■■□□□ 1.95
PABPN1-207ENST00000556821 RLFQ13129 1914 aa27.22■■□□□ 1.95
PABPN1-207ENST00000556821 CEP290O15078 2479 aa27.22■■□□□ 1.95
PABPN1-207ENST00000556821 M0R2C6 588 aa27.22■■□□□ 1.95
PABPN1-207ENST00000556821 BCRP11274 1271 aa27.22■■□□□ 1.95
PABPN1-207ENST00000556821 BACE1P56817 501 aa27.22■■□□□ 1.95
PABPN1-207ENST00000556821 LACTBP83111 547 aaPredicted RBP27.22■■□□□ 1.95
PABPN1-207ENST00000556821 CERKLQ49MI3 558 aaPredicted RBP27.22■■□□□ 1.95
PABPN1-207ENST00000556821 B4GALNT3Q6L9W6 998 aa27.22■■□□□ 1.95
PABPN1-207ENST00000556821 CTGFP29279 349 aa27.21■■□□□ 1.95
PABPN1-207ENST00000556821 C12orf60Q5U649 245 aa27.21■■□□□ 1.95
PABPN1-207ENST00000556821 DYNLL2Q96FJ2 89 aa27.21■■□□□ 1.95
PABPN1-207ENST00000556821 FSD1Q9BTV5 496 aa27.21■■□□□ 1.95
PABPN1-207ENST00000556821 USP17L12C9JPN9 530 aa27.2■■□□□ 1.94
PABPN1-207ENST00000556821 USP17L21D6R901 530 aa27.2■■□□□ 1.94
PABPN1-207ENST00000556821 MYCP01106 439 aaPredicted RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms