RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 TMOD4Q9NZQ9 345 aa22.97■■□□□ 1.27
CDKN3-209ENST00000556102 SAP30BPQ9UHR5 308 aaKnown RBP22.97■■□□□ 1.27
CDKN3-209ENST00000556102 TAOK2Q9UL54 1235 aa22.97■■□□□ 1.27
CDKN3-209ENST00000556102 GDF11O95390 407 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 SGPL1O95470 568 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 CAPN2P17655 700 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 PANK1Q8TE04 598 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 DPF3Q92784 378 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 HTATIP2Q9BUP3 242 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 ZBTB21Q9ULJ3 1066 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 COLQQ9Y215 455 aaPredicted RBP22.96■■□□□ 1.27
CDKN3-209ENST00000556102 EXOC6BQ9Y2D4 811 aa22.96■■□□□ 1.27
CDKN3-209ENST00000556102 C19orf81C9J6K1 198 aa22.95■■□□□ 1.26
CDKN3-209ENST00000556102 FARP2O94887 1054 aaPredicted RBP22.95■■□□□ 1.26
CDKN3-209ENST00000556102 HOXA7P31268 230 aaPredicted RBP22.95■■□□□ 1.26
CDKN3-209ENST00000556102 IRX3P78415 501 aaPredicted RBP22.95■■□□□ 1.26
CDKN3-209ENST00000556102 TMED8Q6PL24 325 aaPredicted RBP22.95■■□□□ 1.26
CDKN3-209ENST00000556102 AACSQ86V21 672 aa22.95■■□□□ 1.26
CDKN3-209ENST00000556102 MAGEB6Q8N7X4 407 aa22.95■■□□□ 1.26
CDKN3-209ENST00000556102 MIGA1Q8NAN2 632 aa22.95■■□□□ 1.26
CDKN3-209ENST00000556102 MORF4L1Q9UBU8 362 aa22.95■■□□□ 1.26
CDKN3-209ENST00000556102 TRIOBPQ9H2D6 2365 aa22.94■■□□□ 1.26
CDKN3-209ENST00000556102 USP17L10C9JJH3 530 aa22.94■■□□□ 1.26
CDKN3-209ENST00000556102 MAP3K12Q12852 859 aa22.94■■□□□ 1.26
CDKN3-209ENST00000556102 SHROOM1Q2M3G4 852 aaPredicted RBP22.94■■□□□ 1.26
CDKN3-209ENST00000556102 PAK6Q9NQU5 681 aaPredicted RBP22.94■■□□□ 1.26
CDKN3-209ENST00000556102 NDUFB9Q9Y6M9 179 aa22.94■■□□□ 1.26
CDKN3-209ENST00000556102 USP5P45974 858 aa22.93■■□□□ 1.26
CDKN3-209ENST00000556102 HSP90AB4PQ58FF6 505 aa22.93■■□□□ 1.26
CDKN3-209ENST00000556102 DEFB118Q96PH6 123 aa22.93■■□□□ 1.26
CDKN3-209ENST00000556102 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
CDKN3-209ENST00000556102 PLXNB2O15031 1838 aa22.93■■□□□ 1.26
CDKN3-209ENST00000556102 MS4A1P11836 297 aa22.92■■□□□ 1.26
CDKN3-209ENST00000556102 FXR1P51114 621 aaKnown RBP eCLIP22.92■■□□□ 1.26
CDKN3-209ENST00000556102 P2RX7Q99572 595 aaKnown RBP22.92■■□□□ 1.26
CDKN3-209ENST00000556102 GJD2Q9UKL4 321 aa22.92■■□□□ 1.26
CDKN3-209ENST00000556102 HERVK_113P62684 666 aa22.91■■□□□ 1.26
CDKN3-209ENST00000556102 EHD4Q9H223 541 aa22.91■■□□□ 1.26
CDKN3-209ENST00000556102 TFRCP02786 760 aaKnown RBP22.9■■□□□ 1.26
CDKN3-209ENST00000556102 HMGCRP04035 888 aa22.9■■□□□ 1.26
CDKN3-209ENST00000556102 TATDN1Q6P1N9 297 aa22.9■■□□□ 1.26
CDKN3-209ENST00000556102 RHPN1Q8TCX5 695 aa22.9■■□□□ 1.26
CDKN3-209ENST00000556102 CRISPLD2Q9H0B8 497 aa22.9■■□□□ 1.26
CDKN3-209ENST00000556102 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.9■■□□□ 1.26
CDKN3-209ENST00000556102 IL1RAPL2Q9NP60 686 aa22.9■■□□□ 1.26
CDKN3-209ENST00000556102 DDX60LQ5H9U9 1706 aaKnown RBP22.89■■□□□ 1.26
CDKN3-209ENST00000556102 GH2P01242 217 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L2Q6R6M4 530 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 CHRDL2Q6WN34 429 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 TTC6Q86TZ1 520 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 EMILIN3Q9NT22 766 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 SERPINB13Q9UIV8 391 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 NAV1Q8NEY1 1877 aa22.89■■□□□ 1.25
CDKN3-209ENST00000556102 TTF1Q15361 905 aaPredicted RBP22.88■■□□□ 1.25
CDKN3-209ENST00000556102 GPRC5AQ8NFJ5 357 aa22.88■■□□□ 1.25
CDKN3-209ENST00000556102 GTF3C2Q8WUA4 911 aaPredicted RBP22.88■■□□□ 1.25
CDKN3-209ENST00000556102 TXNRD2Q9NNW7 524 aa22.88■■□□□ 1.25
CDKN3-209ENST00000556102 NR2E3Q9Y5X4 410 aa22.88■■□□□ 1.25
CDKN3-209ENST00000556102 RPAP2Q8IXW5 612 aaPredicted RBP22.87■■□□□ 1.25
CDKN3-209ENST00000556102 KIF1BPQ96EK5 621 aa22.87■■□□□ 1.25
CDKN3-209ENST00000556102 C12orf42Q96LP6 360 aa22.87■■□□□ 1.25
CDKN3-209ENST00000556102 RIOK1Q9BRS2 568 aaKnown RBP22.87■■□□□ 1.25
CDKN3-209ENST00000556102 RBPJLQ9UBG7 517 aa22.87■■□□□ 1.25
CDKN3-209ENST00000556102 PEX10O60683 326 aa22.86■■□□□ 1.25
CDKN3-209ENST00000556102 ERVK-9P63128 1117 aa22.86■■□□□ 1.25
CDKN3-209ENST00000556102 ERVK-24P63145 666 aa22.86■■□□□ 1.25
CDKN3-209ENST00000556102 CLASRPQ8N2M8 674 aaKnown RBP22.86■■□□□ 1.25
CDKN3-209ENST00000556102 SOCS4Q8WXH5 440 aa22.86■■□□□ 1.25
CDKN3-209ENST00000556102 NUDT12Q9BQG2 462 aa22.86■■□□□ 1.25
CDKN3-209ENST00000556102 HMX1Q9NP08 348 aaPredicted RBP22.86■■□□□ 1.25
CDKN3-209ENST00000556102 DDX19BQ9UMR2 479 aa22.86■■□□□ 1.25
CDKN3-209ENST00000556102 RPTORQ8N122 1335 aa22.85■■□□□ 1.25
CDKN3-209ENST00000556102 ALPK3Q96L96 1907 aa22.85■■□□□ 1.25
CDKN3-209ENST00000556102 HMMRO75330 724 aa22.85■■□□□ 1.25
CDKN3-209ENST00000556102 MAPK4P31152 587 aa22.85■■□□□ 1.25
CDKN3-209ENST00000556102 CERKLQ49MI3 558 aaPredicted RBP22.85■■□□□ 1.25
CDKN3-209ENST00000556102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.85■■□□□ 1.25
CDKN3-209ENST00000556102 TRIB2Q92519 343 aa22.85■■□□□ 1.25
CDKN3-209ENST00000556102 FEZ1Q99689 392 aa22.85■■□□□ 1.25
CDKN3-209ENST00000556102 MAGEB6P1A0A0J9YX57 407 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 PDE6AP16499 860 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 CYP2B6P20813 491 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 USP14P54578 494 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 TRIM32Q13049 653 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 PDE3AQ14432 1141 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 RAB3GAP1Q15042 981 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 ABCB5Q2M3G0 1257 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 SLC9C2Q5TAH2 1124 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 ANKLE1Q8NAG6 615 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 PAWRQ96IZ0 340 aaKnown RBP22.84■■□□□ 1.25
CDKN3-209ENST00000556102 PAGR1Q9BTK6 254 aa22.84■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L15C9J2P7 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L13C9JLJ4 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L11C9JVI0 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L18D6R9N7 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L22D6RA61 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L17D6RBQ6 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L19D6RCP7 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 USP17L20D6RJB6 530 aa22.83■■□□□ 1.25
CDKN3-209ENST00000556102 APBB1O00213 710 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms