RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DHX15O43143 795 aaKnown RBP6.02□□□□□ -1.45
VTI1B-203ENST00000554636 GAS2O43903 313 aaKnown RBP6.02□□□□□ -1.45
VTI1B-203ENST00000554636 DLGAP3O95886 979 aa6.02□□□□□ -1.45
VTI1B-203ENST00000554636 XP32Q5T750 250 aa6.02□□□□□ -1.45
VTI1B-203ENST00000554636 NUTM2GQ5VZR2 741 aa6.02□□□□□ -1.45
VTI1B-203ENST00000554636 CLEC4MQ9H2X3 399 aaPredicted RBP6.02□□□□□ -1.45
VTI1B-203ENST00000554636 RAXQ9Y2V3 346 aa6.02□□□□□ -1.45
VTI1B-203ENST00000554636 RGPD8O14715 1765 aaPredicted RBP6.02□□□□□ -1.45
VTI1B-203ENST00000554636 ANKARQ7Z5J8 1434 aa6.01□□□□□ -1.45
VTI1B-203ENST00000554636 ZNF157P51786 506 aaPredicted RBP6.01□□□□□ -1.45
VTI1B-203ENST00000554636 ZNF423Q2M1K9 1284 aa6.01□□□□□ -1.45
VTI1B-203ENST00000554636 KIAA0319Q5VV43 1072 aa6.01□□□□□ -1.45
VTI1B-203ENST00000554636 ANKRD34AQ69YU3 496 aa6.01□□□□□ -1.45
VTI1B-203ENST00000554636 FAM46AQ96IP4 442 aaKnown RBP6.01□□□□□ -1.45
VTI1B-203ENST00000554636 PRAM1Q96QH2 718 aa6.01□□□□□ -1.45
VTI1B-203ENST00000554636 STOML1Q9UBI4 398 aa6.01□□□□□ -1.45
VTI1B-203ENST00000554636 NPHP3Q7Z494 1330 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 TULP4Q9NRJ4 1543 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 PNMA6FA0A0J9YX94 578 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 HMX2A2RU54 273 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 ECEL1O95672 775 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 BMP3P12645 472 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 GRM2Q14416 872 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 UVSSAQ2YD98 709 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 TRIM42Q8IWZ5 723 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 C12orf50Q8NA57 414 aaPredicted RBP6□□□□□ -1.45
VTI1B-203ENST00000554636 LRRC59Q96AG4 307 aaKnown RBP6□□□□□ -1.45
VTI1B-203ENST00000554636 ALKBH8Q96BT7 664 aaKnown RBP6□□□□□ -1.45
VTI1B-203ENST00000554636 MYRFLQ96LU7 910 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 DNAJC25Q9H1X3 360 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 ZNF576Q9H609 170 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 SOX17Q9H6I2 414 aaPredicted RBP6□□□□□ -1.45
VTI1B-203ENST00000554636 C7orf69Q9H7B7 122 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 ABCB6Q9NP58 842 aa6□□□□□ -1.45
VTI1B-203ENST00000554636 TOPAZ1Q8N9V7 1692 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 CTSBP07858 339 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 DRD2P14416 443 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 MAOBP27338 520 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 RXRBP28702 533 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 MAPK8P45983 427 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 KCNA1Q09470 495 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 SAFB2Q14151 953 aaKnown RBP eCLIP5.99□□□□□ -1.45
VTI1B-203ENST00000554636 SGO2Q562F6 1265 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 MEX3CQ5U5Q3 659 aaKnown RBP5.99□□□□□ -1.45
VTI1B-203ENST00000554636 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.99□□□□□ -1.45
VTI1B-203ENST00000554636 TRAK1Q9UPV9 953 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 ABCA3Q99758 1704 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 TRPM3Q9HCF6 1732 aaPredicted RBP5.99□□□□□ -1.45
VTI1B-203ENST00000554636 MARF1Q9Y4F3 1742 aaKnown RBP5.99□□□□□ -1.45
VTI1B-203ENST00000554636 TRPM1Q7Z4N2 1603 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 PRR36Q9H6K5 1346 aa5.99□□□□□ -1.45
VTI1B-203ENST00000554636 ATP7BP35670 1465 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 EIF3AQ14152 1382 aaKnown RBP5.98□□□□□ -1.45
VTI1B-203ENST00000554636 FCGRTP55899 365 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 XPCQ01831 940 aaPredicted RBP5.98□□□□□ -1.45
VTI1B-203ENST00000554636 POU4F3Q15319 338 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 BEND4Q6ZU67 534 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 FAM20CQ8IXL6 584 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 SIN3AQ96ST3 1273 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 SETDB2Q96T68 719 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 CORO1BQ9BR76 489 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 TMPRSS13Q9BYE2 586 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 CYP4F12Q9HCS2 524 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 NLRP2Q9NX02 1062 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 POGKQ9P215 609 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 TNS3Q68CZ2 1445 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 AFF2P51816 1311 aa5.98□□□□□ -1.45
VTI1B-203ENST00000554636 ITSN1Q15811 1721 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 SBNO1A3KN83 1393 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 TMEM238LA0A1B0GVL6 79 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 B3GALT4O96024 378 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 IGLV1-40P01703 118 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 CYP11A1P05108 521 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 ITPKAP23677 461 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 SSTR4P31391 388 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 PLCB3Q01970 1234 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 PDE3AQ14432 1141 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 ZNF772Q68DY9 489 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-203ENST00000554636 DTHD1Q6ZMT9 781 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 AEBP1Q8IUX7 1158 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 GLIS3Q8NEA6 775 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 TRIM56Q9BRZ2 755 aaKnown RBP5.97□□□□□ -1.45
VTI1B-203ENST00000554636 ZC3H12CQ9C0D7 883 aaKnown RBP5.97□□□□□ -1.45
VTI1B-203ENST00000554636 NRSN2Q9GZP1 204 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 ALS2Q96Q42 1657 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 SPATA31A3Q5VYP0 1347 aa5.97□□□□□ -1.45
VTI1B-203ENST00000554636 CRYBG1Q9Y4K1 1723 aa5.96□□□□□ -1.45
VTI1B-203ENST00000554636 CDK12Q9NYV4 1490 aaPredicted RBP5.96□□□□□ -1.45
VTI1B-203ENST00000554636 QRICH2Q9H0J4 1663 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 MEGF11A6BM72 1044 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 TREHO43280 583 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 TGFB1P01137 390 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 MAP4P27816 1152 aaKnown RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 FAAP100Q0VG06 881 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 NFIAQ12857 509 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 AKAP4Q5JQC9 854 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 EXOSC6Q5RKV6 272 aaKnown RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 PRPF40BQ6NWY9 871 aaKnown RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 SMG8Q8ND04 991 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms