RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
PABPN1-203ENST00000553960 ZNF70Q9UC06 446 aaPredicted RBP12.74□□□□□ -0.37
PABPN1-203ENST00000553960 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 SLC12A7Q9Y666 1083 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 WNT10BO00744 389 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 MYO1BO43795 1136 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 CYP2D6P10635 497 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 SYT1P21579 422 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 FUT2Q10981 343 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 NFIAQ12857 509 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 SYNE3Q6ZMZ3 975 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 TEX2Q8IWB9 1127 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
PABPN1-203ENST00000553960 LZTS2Q9BRK4 669 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 MYOZ2Q9NPC6 264 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
PABPN1-203ENST00000553960 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
PABPN1-203ENST00000553960 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
PABPN1-203ENST00000553960 STX6O43752 255 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
PABPN1-203ENST00000553960 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 GJB2P29033 226 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 SHMT1P34896 483 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 GNAQP50148 359 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 TFAP4Q01664 338 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
PABPN1-203ENST00000553960 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.72□□□□□ -0.37
PABPN1-203ENST00000553960 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
PABPN1-203ENST00000553960 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 GPRC5DQ9NZD1 345 aa12.72□□□□□ -0.37
PABPN1-203ENST00000553960 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 SMIM22K7EJ46 135 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 TOP1P11387 765 aaKnown RBP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 FDPSP14324 419 aaKnown RBP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
PABPN1-203ENST00000553960 MTMR4Q9NYA4 1195 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
PABPN1-203ENST00000553960 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 KIF5BP33176 963 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 TNNI2P48788 182 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 GMPSP49915 693 aaPredicted RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 RASSF7Q02833 373 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 CHST3Q7LGC8 479 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 WASF1Q92558 559 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 TNPO1Q92973 898 aaKnown RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 DYNLL2Q96FJ2 89 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 KANSL2Q9H9L4 492 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 CNOT7Q9UIV1 285 aaKnown RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
PABPN1-203ENST00000553960 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
PABPN1-203ENST00000553960 SCN4AP35499 1836 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 PTPDC1A2A3K4 754 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 H7C1D1 291 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 PRPF3O43395 683 aaKnown RBP12.69□□□□□ -0.38
PABPN1-203ENST00000553960 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
PABPN1-203ENST00000553960 RBM5P52756 815 aaKnown RBP eCLIP12.69□□□□□ -0.38
PABPN1-203ENST00000553960 RTN1Q16799 776 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
PABPN1-203ENST00000553960 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 NBPF11Q86T75 865 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 FBXO18Q8NFZ0 1043 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
PABPN1-203ENST00000553960 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
PABPN1-203ENST00000553960 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
PABPN1-203ENST00000553960 ZNF541Q9H0D2 1346 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
PABPN1-203ENST00000553960 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 CPLX1O14810 134 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 TTLL1O95922 423 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms