RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 LAMA3Q16787 3333 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 SEMA3EO15041 775 aa13.77□□□□□ -0.21
TMEM116-218ENST00000552839 TRIM32Q13049 653 aa13.77□□□□□ -0.21
TMEM116-218ENST00000552839 Q7L0L9 218 aa13.77□□□□□ -0.21
TMEM116-218ENST00000552839 DEFB123Q8N688 67 aa13.77□□□□□ -0.21
TMEM116-218ENST00000552839 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
TMEM116-218ENST00000552839 DNAJC2Q99543 621 aaKnown RBP13.77□□□□□ -0.21
TMEM116-218ENST00000552839 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
TMEM116-218ENST00000552839 HMGCRP04035 888 aa13.76□□□□□ -0.21
TMEM116-218ENST00000552839 SYN1P17600 705 aa13.76□□□□□ -0.21
TMEM116-218ENST00000552839 PICALMQ13492 652 aa13.76□□□□□ -0.21
TMEM116-218ENST00000552839 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
TMEM116-218ENST00000552839 GJD2Q9UKL4 321 aa13.76□□□□□ -0.21
TMEM116-218ENST00000552839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.76□□□□□ -0.21
TMEM116-218ENST00000552839 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
TMEM116-218ENST00000552839 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
TMEM116-218ENST00000552839 GLRX3O76003 335 aaKnown RBP13.75□□□□□ -0.21
TMEM116-218ENST00000552839 BTDP43251 543 aa13.75□□□□□ -0.21
TMEM116-218ENST00000552839 LRIT3Q3SXY7 679 aa13.75□□□□□ -0.21
TMEM116-218ENST00000552839 PROCA1Q8NCQ7 364 aaPredicted RBP13.75□□□□□ -0.21
TMEM116-218ENST00000552839 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
TMEM116-218ENST00000552839 NBPF3Q9H094 633 aa13.75□□□□□ -0.21
TMEM116-218ENST00000552839 HMX1Q9NP08 348 aaPredicted RBP13.75□□□□□ -0.21
TMEM116-218ENST00000552839 PNMA3Q9UL41 463 aa13.75□□□□□ -0.21
TMEM116-218ENST00000552839 ZBTB22O15209 634 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 TBC1D12O60347 775 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 ARID4AP29374 1257 aaPredicted RBP13.74□□□□□ -0.21
TMEM116-218ENST00000552839 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
TMEM116-218ENST00000552839 SPP2Q13103 211 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 DZIP1Q86YF9 867 aaKnown RBP13.74□□□□□ -0.21
TMEM116-218ENST00000552839 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 BOLA2Q9H3K6 86 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 C11orf49Q9H6J7 331 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.21
TMEM116-218ENST00000552839 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 MTMR10Q9NXD2 777 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 STXBP5LQ9Y2K9 1186 aa13.74□□□□□ -0.21
TMEM116-218ENST00000552839 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 GCLCP48506 637 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-218ENST00000552839 RHBDL3P58872 404 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-218ENST00000552839 SPTY2D1Q68D10 685 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-218ENST00000552839 SLF2Q8IX21 1173 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 TDHQ8IZJ6 230 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 ZNF280CQ8ND82 737 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 OTUD7AQ8TE49 926 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-218ENST00000552839 TRIB2Q92519 343 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 OSBPL5Q9H0X9 879 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-218ENST00000552839 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-218ENST00000552839 OGDHLQ9ULD0 1010 aa13.73□□□□□ -0.21
TMEM116-218ENST00000552839 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 GOLIM4O00461 696 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 ATP5JP18859 108 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 MCAMP43121 646 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 HMGCS2P54868 508 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
TMEM116-218ENST00000552839 LRRFIP1Q32MZ4 808 aaKnown RBP13.72□□□□□ -0.21
TMEM116-218ENST00000552839 ZNF384Q8TF68 577 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM116-218ENST00000552839 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 LRP2BPQ9P2M1 347 aa13.72□□□□□ -0.21
TMEM116-218ENST00000552839 PFASO15067 1338 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
TMEM116-218ENST00000552839 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 CAP2P40123 477 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 ZAP70P43403 619 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 PDE1AP54750 535 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 MECOMQ03112 1051 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.21
TMEM116-218ENST00000552839 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.21
TMEM116-218ENST00000552839 NOL10Q9BSC4 688 aaKnown RBP13.71□□□□□ -0.21
TMEM116-218ENST00000552839 UBE2OQ9C0C9 1292 aaKnown RBP13.71□□□□□ -0.21
TMEM116-218ENST00000552839 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■□□□□ 8.8
TMEM116-218ENST00000552839 PAG1Q9NWQ8 432 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
TMEM116-218ENST00000552839 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
TMEM116-218ENST00000552839 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
TMEM116-218ENST00000552839 MAP4K4O95819 1239 aaPredicted RBP13.7□□□□□ -0.22
TMEM116-218ENST00000552839 CYP2B6P20813 491 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 MAP3K21Q5TCX8 1036 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 FSD1Q9BTV5 496 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 MORF4L1Q9UBU8 362 aa13.7□□□□□ -0.22
TMEM116-218ENST00000552839 FRMPD3Q5JV73 1810 aa13.69□□□□□ -0.22
TMEM116-218ENST00000552839 PEX10O60683 326 aa13.69□□□□□ -0.22
TMEM116-218ENST00000552839 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
TMEM116-218ENST00000552839 ZSCAN25Q6NSZ9 544 aa13.69□□□□□ -0.22
TMEM116-218ENST00000552839 PLEKHM2Q8IWE5 1019 aa13.69□□□□□ -0.22
TMEM116-218ENST00000552839 HAUS7Q99871 368 aa13.69□□□□□ -0.22
TMEM116-218ENST00000552839 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
TMEM116-218ENST00000552839 NDUFB9Q9Y6M9 179 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms