RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FAM221BA6H8Z2 402 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 MZF1P28698 734 aaPredicted RBP8.02□□□□□ -1.13
VPS29-210ENST00000552130 USP5P45974 858 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 SYCP2LQ5T4T6 812 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 OGFOD2Q6N063 350 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 ANKS3Q6ZW76 656 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 SHISA5Q8N114 240 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 NUDT16Q96DE0 195 aaKnown RBP8.02□□□□□ -1.13
VPS29-210ENST00000552130 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
VPS29-210ENST00000552130 ESYT3A0FGR9 886 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 CFAP69A5D8W1 941 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 PDE2AO00408 941 aaPredicted RBP8.01□□□□□ -1.13
VPS29-210ENST00000552130 TSPAN6O43657 245 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 FZD6O60353 706 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 FOSP01100 380 aaPredicted RBP8.01□□□□□ -1.13
VPS29-210ENST00000552130 FGAP02671 866 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 C19orf57Q0VDD7 668 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 AAMPQ13685 434 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 BRDTQ58F21 947 aaPredicted RBP8.01□□□□□ -1.13
VPS29-210ENST00000552130 PPP4R4Q6NUP7 873 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 LRP10Q7Z4F1 713 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 C1orf127Q8N9H9 656 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
VPS29-210ENST00000552130 RASGRP4Q8TDF6 673 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 PPM1EQ8WY54 764 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 SEC16BQ96JE7 1060 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 HHIPQ96QV1 700 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 ARPC5LQ9BPX5 153 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 ARNT2Q9HBZ2 717 aa8.01□□□□□ -1.13
VPS29-210ENST00000552130 SOX1O00570 391 aaPredicted RBP8□□□□□ -1.13
VPS29-210ENST00000552130 NRDCO43847 1150 aa8□□□□□ -1.13
VPS29-210ENST00000552130 ITGB5P18084 799 aa8□□□□□ -1.13
VPS29-210ENST00000552130 RAB33AQ14088 237 aa8□□□□□ -1.13
VPS29-210ENST00000552130 PPP2R5AQ15172 486 aa8□□□□□ -1.13
VPS29-210ENST00000552130 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
VPS29-210ENST00000552130 POU5F2Q8N7G0 328 aa8□□□□□ -1.13
VPS29-210ENST00000552130 NIF3L1Q9GZT8 377 aa8□□□□□ -1.13
VPS29-210ENST00000552130 CHRDQ9H2X0 955 aa8□□□□□ -1.13
VPS29-210ENST00000552130 ATG3Q9NT62 314 aa8□□□□□ -1.13
VPS29-210ENST00000552130 KLF4O43474 513 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 DLGAP3O95886 979 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 RPLP1P05386 114 aaKnown RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 MYL1P05976 194 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 NEFMP07197 916 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 MAN1A1P33908 653 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 EIF1AXP47813 144 aaKnown RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 CDKN1CP49918 316 aaPredicted RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 NFE2Q16621 373 aaPredicted RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 ALKBH2Q6NS38 261 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 VN1R5Q7Z5H4 357 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 GIMAP7Q8NHV1 300 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 FBF1Q8TES7 1133 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 FBXL18Q96ME1 805 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 FEZ1Q99689 392 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 CASS4Q9NQ75 786 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 NRBP1Q9UHY1 535 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 ANGEL1Q9UNK9 670 aaKnown RBP7.99□□□□□ -1.13
VPS29-210ENST00000552130 SCINQ9Y6U3 715 aa7.99□□□□□ -1.13
VPS29-210ENST00000552130 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 TRPA1O75762 1119 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 PDE6BP35913 854 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 ARL4DP49703 201 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 C16orf86Q6ZW13 317 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 LILRB2Q8N423 598 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 NXPE3Q969Y0 559 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 PAGR1Q9BTK6 254 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 OSBPL1AQ9BXW6 950 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 INO80BQ9C086 356 aaPredicted RBP7.98□□□□□ -1.13
VPS29-210ENST00000552130 ANAPC4Q9UJX5 808 aa7.98□□□□□ -1.13
VPS29-210ENST00000552130 CCDC85CA6NKD9 419 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 ANP32CO43423 234 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 BPNT1O95861 308 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 CES1P23141 567 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 EIF4BP23588 611 aaKnown RBP7.97□□□□□ -1.13
VPS29-210ENST00000552130 ETFBP38117 255 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 EPHB1P54762 984 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 NUTM2GQ5VZR2 741 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 KRT26Q7Z3Y9 468 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 ATCAYQ86WG3 371 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 JAMLQ86YT9 394 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 FBXL6Q8N531 539 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 EZH1Q92800 747 aaPredicted RBP7.97□□□□□ -1.13
VPS29-210ENST00000552130 GATA6Q92908 595 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 GGNBP2Q9H3C7 697 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 CHST12Q9NRB3 414 aa7.97□□□□□ -1.13
VPS29-210ENST00000552130 FAM95CA0A1B0GW59 222 aa7.96□□□□□ -1.14
VPS29-210ENST00000552130 ALDH1L1O75891 902 aa7.96□□□□□ -1.14
VPS29-210ENST00000552130 ADMP35318 185 aa7.96□□□□□ -1.14
VPS29-210ENST00000552130 CDPF1Q6NVV7 123 aa7.96□□□□□ -1.14
VPS29-210ENST00000552130 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.96□□□□□ -1.14
VPS29-210ENST00000552130 PAF1Q8N7H5 531 aa7.96□□□□□ -1.14
VPS29-210ENST00000552130 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.14
VPS29-210ENST00000552130 HNRNPLLQ8WVV9 542 aaKnown RBP7.96□□□□□ -1.14
VPS29-210ENST00000552130 BSNDQ8WZ55 320 aa7.96□□□□□ -1.14
VPS29-210ENST00000552130 METTL22Q9BUU2 404 aaPredicted RBP7.96□□□□□ -1.14
VPS29-210ENST00000552130 KRTAP4-2Q9BYR5 136 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms