RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ZFPM1Q8IX07 1006 aa18.91■□□□□ 0.62
BRF1-220ENST00000552127 SLF2Q8IX21 1173 aa18.91■□□□□ 0.62
BRF1-220ENST00000552127 PNMA3Q9UL41 463 aa18.91■□□□□ 0.62
BRF1-220ENST00000552127 DDX19BQ9UMR2 479 aa18.91■□□□□ 0.62
BRF1-220ENST00000552127 ATRNL1Q5VV63 1379 aa18.91■□□□□ 0.62
BRF1-220ENST00000552127 LTBP2Q14767 1821 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 DOCK1Q14185 1865 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 TMEM265A0A087WTH1 108 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 MCAMP43121 646 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 ERICH6Q7L0X2 663 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 DBNDD2Q9BQY9 259 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 USP40Q9NVE5 1235 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 COG6Q9Y2V7 657 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 MROH7-TTC4A0A0A0MT08 1334 aa18.9■□□□□ 0.62
BRF1-220ENST00000552127 ATAD5Q96QE3 1844 aa18.89■□□□□ 0.61
BRF1-220ENST00000552127 CYP2B6P20813 491 aa18.89■□□□□ 0.61
BRF1-220ENST00000552127 MECOMQ03112 1051 aa18.89■□□□□ 0.61
BRF1-220ENST00000552127 SHHQ15465 462 aa18.89■□□□□ 0.61
BRF1-220ENST00000552127 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
BRF1-220ENST00000552127 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
BRF1-220ENST00000552127 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
BRF1-220ENST00000552127 GCLCP48506 637 aaPredicted RBP18.88■□□□□ 0.61
BRF1-220ENST00000552127 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
BRF1-220ENST00000552127 LHX8Q68G74 356 aa18.88■□□□□ 0.61
BRF1-220ENST00000552127 FAM163AQ96GL9 167 aaPredicted RBP18.88■□□□□ 0.61
BRF1-220ENST00000552127 BTDP43251 543 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 CACNB2Q08289 660 aaPredicted RBP18.87■□□□□ 0.61
BRF1-220ENST00000552127 FRMPD3Q5JV73 1810 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 C9orf50Q5SZB4 431 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 TBC1D9Q6ZT07 1266 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 CCDC84Q86UT8 332 aaPredicted RBP18.87■□□□□ 0.61
BRF1-220ENST00000552127 ERC1Q8IUD2 1116 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 IDI2Q9BXS1 227 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
BRF1-220ENST00000552127 SLURP2P0DP57 97 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 CCND3P30281 292 aaPredicted RBP18.86■□□□□ 0.61
BRF1-220ENST00000552127 RGS3P49796 1198 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 GSTO1P78417 241 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 SMAD3P84022 425 aaKnown RBP18.86■□□□□ 0.61
BRF1-220ENST00000552127 USP38Q8NB14 1042 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 NSUN4Q96CB9 384 aaKnown RBP18.86■□□□□ 0.61
BRF1-220ENST00000552127 SENP6Q9GZR1 1112 aaPredicted RBP18.86■□□□□ 0.61
BRF1-220ENST00000552127 ZBTB40Q9NUA8 1239 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 TLR7Q9NYK1 1049 aaKnown RBP18.86■□□□□ 0.61
BRF1-220ENST00000552127 RAI14Q9P0K7 980 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 DBNLQ9UJU6 430 aaKnown RBP18.86■□□□□ 0.61
BRF1-220ENST00000552127 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
BRF1-220ENST00000552127 CTNND1O60716 968 aaKnown RBP18.85■□□□□ 0.61
BRF1-220ENST00000552127 ENTPD3O75355 529 aa18.85■□□□□ 0.61
BRF1-220ENST00000552127 PROCA1Q8NCQ7 364 aaPredicted RBP18.85■□□□□ 0.61
BRF1-220ENST00000552127 EAF2Q96CJ1 260 aaPredicted RBP18.85■□□□□ 0.61
BRF1-220ENST00000552127 ZNF512BQ96KM6 892 aaPredicted RBP18.85■□□□□ 0.61
BRF1-220ENST00000552127 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
BRF1-220ENST00000552127 SNRKQ9NRH2 765 aa18.85■□□□□ 0.61
BRF1-220ENST00000552127 PRKAG2Q9UGJ0 569 aa18.85■□□□□ 0.61
BRF1-220ENST00000552127 SIPA1L1O43166 1804 aa18.85■□□□□ 0.61
BRF1-220ENST00000552127 GPR75-ASB3A0A0A6YYF3 556 aa18.84■□□□□ 0.61
BRF1-220ENST00000552127 LDHCP07864 332 aa18.84■□□□□ 0.61
BRF1-220ENST00000552127 XRCC5P13010 732 aaKnown RBP18.84■□□□□ 0.61
BRF1-220ENST00000552127 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
BRF1-220ENST00000552127 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
BRF1-220ENST00000552127 HSP90AB4PQ58FF6 505 aa18.84■□□□□ 0.61
BRF1-220ENST00000552127 RPAP2Q8IXW5 612 aaPredicted RBP18.84■□□□□ 0.61
BRF1-220ENST00000552127 CCDC8Q9H0W5 538 aaPredicted RBP18.84■□□□□ 0.61
BRF1-220ENST00000552127 LRP2BPQ9P2M1 347 aa18.84■□□□□ 0.61
BRF1-220ENST00000552127 MYH1P12882 1939 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 MYH7P12883 1935 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 HMMRO75330 724 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 ATN1P54259 1190 aaPredicted RBP18.83■□□□□ 0.6
BRF1-220ENST00000552127 RHBDL3P58872 404 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 MAP3K10Q02779 954 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 SH3BP5LQ7L8J4 393 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 NUDT12Q9BQG2 462 aa18.83■□□□□ 0.6
BRF1-220ENST00000552127 ASCC2Q9H1I8 757 aaPredicted RBP18.83■□□□□ 0.6
BRF1-220ENST00000552127 ZKSCAN1P17029 563 aaPredicted RBP18.82■□□□□ 0.6
BRF1-220ENST00000552127 C20orf194Q5TEA3 1177 aa18.82■□□□□ 0.6
BRF1-220ENST00000552127 DDX4Q9NQI0 724 aaKnown RBP18.82■□□□□ 0.6
BRF1-220ENST00000552127 MORF4L1Q9UBU8 362 aa18.82■□□□□ 0.6
BRF1-220ENST00000552127 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
BRF1-220ENST00000552127 CYP2E1P05181 493 aaPredicted RBP18.81■□□□□ 0.6
BRF1-220ENST00000552127 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
BRF1-220ENST00000552127 PICALMQ13492 652 aa18.81■□□□□ 0.6
BRF1-220ENST00000552127 AACSQ86V21 672 aa18.81■□□□□ 0.6
BRF1-220ENST00000552127 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
BRF1-220ENST00000552127 SIRT2Q8IXJ6 389 aa18.81■□□□□ 0.6
BRF1-220ENST00000552127 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
BRF1-220ENST00000552127 SOCS4Q8WXH5 440 aa18.81■□□□□ 0.6
BRF1-220ENST00000552127 BDP1A6H8Y1 2624 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 DDTLA6NHG4 134 aaPredicted RBP18.8■□□□□ 0.6
BRF1-220ENST00000552127 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
BRF1-220ENST00000552127 ZAP70P43403 619 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 RTP1P59025 263 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 SPP2Q13103 211 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 CCL14Q16627 93 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
BRF1-220ENST00000552127 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 NOL10Q9BSC4 688 aaKnown RBP18.8■□□□□ 0.6
BRF1-220ENST00000552127 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
BRF1-220ENST00000552127 PEX10O60683 326 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms