RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 EFCAB5A4FU69 1503 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 UACAQ9BZF9 1416 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 CDK8P49336 464 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 PDE4BQ07343 736 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 MTERF2Q49AM1 385 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 SH3TC2Q8TF17 1288 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 PLPPR2Q96GM1 343 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 TM9SF2Q99805 663 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 CARD10Q9BWT7 1032 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 USP26Q9BXU7 913 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 CCDC86Q9H6F5 360 aaKnown RBP7.51□□□□□ -1.21
CPSF6-206ENST00000550987 RAD18Q9NS91 495 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 KRT82Q9NSB4 513 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 NXF1Q9UBU9 619 aaKnown RBP7.51□□□□□ -1.21
CPSF6-206ENST00000550987 RTEL1-TNFRSF6BF6WH68 1400 aa7.51□□□□□ -1.21
CPSF6-206ENST00000550987 NEURL4Q96JN8 1562 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 ENPP3O14638 875 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 CDC45O75419 566 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 HTR3BO95264 441 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 SLFN14P0C7P3 912 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 PLCG1P19174 1290 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 IGBP1P78318 339 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 RBM6P78332 1123 aaKnown RBP7.5□□□□□ -1.21
CPSF6-206ENST00000550987 RASGRF1Q13972 1273 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 INPP5AQ14642 412 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 PTPROQ16827 1216 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 HP1BP3Q5SSJ5 553 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-206ENST00000550987 Q6ZNB5 142 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 DEFB132Q7Z7B7 95 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 TTC6Q86TZ1 520 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 HOMER1Q86YM7 354 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 LILRB2Q8N423 598 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 ZCRB1Q8TBF4 217 aaKnown RBP7.5□□□□□ -1.21
CPSF6-206ENST00000550987 APPBP2Q92624 585 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 ANTXR1Q9H6X2 564 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 CWC22Q9HCG8 908 aaKnown RBP7.5□□□□□ -1.21
CPSF6-206ENST00000550987 FANCLQ9NW38 375 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 MSRB2Q9Y3D2 182 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 SLC12A7Q9Y666 1083 aa7.5□□□□□ -1.21
CPSF6-206ENST00000550987 ZMYM4Q5VZL5 1548 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 hCG_2014768A0A024R1R8 64 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 A0A1W2PQH9 124 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 GFRA2O00451 464 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 GJB6O95452 261 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 LIG1P18858 919 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 GUCY2CP25092 1073 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 AFF1P51825 1210 aaKnown RBP7.49□□□□□ -1.21
CPSF6-206ENST00000550987 TAF7LQ5H9L4 462 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 LRFN4Q6PJG9 635 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 SLCO4C1Q6ZQN7 724 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 GPR161Q8N6U8 529 aaKnown RBP7.49□□□□□ -1.21
CPSF6-206ENST00000550987 C19orf47Q8N9M1 422 aaKnown RBP7.49□□□□□ -1.21
CPSF6-206ENST00000550987 KLHL23Q8NBE8 558 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 KLHDC7BQ96G42 594 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 MDFIQ99750 246 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 STARD13Q9Y3M8 1113 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 CORINQ9Y5Q5 1042 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 NEO1Q92859 1461 aa7.49□□□□□ -1.21
CPSF6-206ENST00000550987 NINLQ9Y2I6 1382 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ABCA10Q8WWZ4 1543 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 PRAMEF27A3QJZ7 478 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 DCDC2CA8MYV0 355 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 M0R082 166 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ECEL1O95672 775 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ALBP02768 609 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 EPXP11678 715 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 BAG6P46379 1132 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 BLMP54132 1417 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-206ENST00000550987 NLRP12P59046 1061 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ANAPC15P60006 121 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 SUZ12Q15022 739 aaKnown RBP7.48□□□□□ -1.21
CPSF6-206ENST00000550987 GRIK5Q16478 980 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 MSL1Q68DK7 614 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 C6orf15Q6UXA7 325 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-206ENST00000550987 FILIP1Q7Z7B0 1213 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 C12orf40Q86WS4 652 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 FAM178BQ8IXR5 827 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 TMEM40Q8WWA1 233 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-206ENST00000550987 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-206ENST00000550987 REV1Q9UBZ9 1251 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 CSADQ9Y600 493 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 MYO3AQ8NEV4 1616 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 PITPNM2Q9BZ72 1349 aa7.48□□□□□ -1.21
CPSF6-206ENST00000550987 ETF1P62495 437 aaKnown RBP7.47□□□□□ -1.21
CPSF6-206ENST00000550987 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 GALNT6Q8NCL4 622 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 GMIPQ9P107 970 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 KLHL3Q9UH77 587 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 SCAF11Q99590 1463 aaKnown RBP7.47□□□□□ -1.21
CPSF6-206ENST00000550987 AFF2P51816 1311 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 SPATA31A6Q5VVP1 1343 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 KDM2BQ8NHM5 1336 aa7.47□□□□□ -1.21
CPSF6-206ENST00000550987 CEP170BQ9Y4F5 1589 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-206ENST00000550987 COL16A1Q07092 1604 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-206ENST00000550987 ESYT3A0FGR9 886 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms