RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 FAM35AQ86V20 835 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 CRIPAKQ8N1N5 446 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 TMEM40Q8WWA1 233 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 TRIM33Q9UPN9 1127 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 PHF24Q9UPV7 400 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 SUGT1Q9Y2Z0 365 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 SOX1O00570 391 aaPredicted RBP8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 AXIN1O15169 862 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 HTR3BO95264 441 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 TBC1D8BQ0IIM8 1120 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 AP3B2Q13367 1082 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 ZNF468Q5VIY5 522 aaPredicted RBP8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 MICALL1Q8N3F8 863 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 NAGPAQ9UK23 515 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 SYCP2Q9BX26 1530 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 CLIP1P30622 1438 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 PLXNC1O60486 1568 aa8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 INO80Q9ULG1 1556 aaPredicted RBP8.4□□□□□ -1.06
TGFBR1-208ENST00000550253 ACRP10323 421 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 IKBKEQ14164 716 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 EEPD1Q7L9B9 569 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 DDX54Q8TDD1 881 aaKnown RBP8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 TNFRSF25Q93038 417 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 SMG9Q9H0W8 520 aaKnown RBP8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 SLC6A14Q9UN76 642 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 PLAAQ9Y263 795 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 IQSEC2Q5JU85 1478 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 S100BP04271 92 aaPredicted RBP8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 FAM153BP0C7A2 387 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 ITGA6P23229 1130 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 ZYXQ15942 572 aaKnown RBP8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 HGSNATQ68CP4 663 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 INTS3Q68E01 1043 aaKnown RBP8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 ZSWIM2Q8NEG5 633 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 CASKIN1Q8WXD9 1431 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 LPIN3Q9BQK8 851 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 G3BP2Q9UN86 482 aaKnown RBP8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 CORINQ9Y5Q5 1042 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 SLC12A7Q9Y666 1083 aa8.39□□□□□ -1.07
TGFBR1-208ENST00000550253 ZNF335Q9H4Z2 1342 aaPredicted RBP8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 C2CD2LO14523 706 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 ADCY3O60266 1144 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 EPHA1P21709 976 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 INPP5AQ14642 412 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 LONRF2Q1L5Z9 754 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 TMEM67Q5HYA8 995 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 UNC5AQ6ZN44 842 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 GPBAR1Q8TDU6 330 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 SPATA9Q9BWV2 254 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 SLC52A1Q9NWF4 448 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 GMIPQ9P107 970 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 PCDHA4Q9UN74 947 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 CCDC18Q5T9S5 1454 aa8.38□□□□□ -1.07
TGFBR1-208ENST00000550253 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 NPATQ14207 1427 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 DGAT1O75907 488 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 NME1P15531 152 aaKnown RBP8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 NCAPHQ15003 741 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 TM4SF20Q53R12 229 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 WIPI1Q5MNZ9 446 aaPredicted RBP8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 VHLLQ6RSH7 139 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 ATG4CQ96DT6 458 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 IER2Q9BTL4 223 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 SOX17Q9H6I2 414 aaPredicted RBP8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 FRRS1LQ9P0K9 344 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 FAN1Q9Y2M0 1017 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 SNCAIPQ9Y6H5 919 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 ATP7AQ04656 1500 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 GPATCH8Q9UKJ3 1502 aaKnown RBP8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 ZMYM3Q14202 1370 aa8.37□□□□□ -1.07
TGFBR1-208ENST00000550253 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 TCOF1Q13428 1488 aaKnown RBP8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 SLC22A31A6NKX4 558 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 KCNQ2O43526 872 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 DNAJA2O60884 412 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 CDC27P30260 824 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 PCBP4P57723 403 aaKnown RBP8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 OVOS1Q6IE37 1185 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 LRFN4Q6PJG9 635 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 ZBTB38Q8NAP3 1195 aaPredicted RBP8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 PLPPR2Q96GM1 343 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 MDFIQ99750 246 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 REV1Q9UBZ9 1251 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 PTPRKQ15262 1439 aa8.36□□□□□ -1.07
TGFBR1-208ENST00000550253 TNFRSF10CO14798 259 aa8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 JAMLQ86YT9 394 aa8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 PRPF38AQ8NAV1 312 aaKnown RBP8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 TTC9Q92623 222 aa8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 NINJ1Q92982 152 aa8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 FAM126AQ9BYI3 521 aaPredicted RBP8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
TGFBR1-208ENST00000550253 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms