RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 SAMSN1Q9NSI8 373 aaKnown RBP11.76□□□□□ -0.53
ERBB3-214ENST00000550070 CHD4Q14839 1912 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 LRP6O75581 1613 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 PDE8BO95263 885 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 ARID4AP29374 1257 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-214ENST00000550070 ALX1Q15699 326 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 GIGYF2Q6Y7W6 1299 aaKnown RBP11.75□□□□□ -0.53
ERBB3-214ENST00000550070 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
ERBB3-214ENST00000550070 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 SHANK3Q9BYB0 1731 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 SASH3O75995 380 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CYP2C19P33261 490 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CTSWP56202 376 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 NLRP10Q86W26 655 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 MLKLQ8NB16 471 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 SMARCE1Q969G3 411 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 HOOK1Q9UJC3 728 aaKnown RBP11.75□□□□□ -0.53
ERBB3-214ENST00000550070 MRFAP1Q9Y605 127 aa11.75□□□□□ -0.53
ERBB3-214ENST00000550070 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 TPM1P09493 284 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 IL2RBP14784 551 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 NR5A1Q13285 461 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 NBPF9Q3BBW0 867 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 USP49Q70CQ1 688 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-214ENST00000550070 DESI2Q9BSY9 194 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 NAPBQ9H115 298 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 MAP3K15Q6ZN16 1313 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 GOLGA6L9A6NEM1 432 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 MBD4O95243 580 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 TBC1D8O95759 1140 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 MTF1Q14872 753 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 NR1I3Q14994 352 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 RSRC2Q7L4I2 434 aaKnown RBP11.74□□□□□ -0.53
ERBB3-214ENST00000550070 ARMT1Q9H993 441 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 MYH3P11055 1940 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 EP400Q96L91 3159 aa11.74□□□□□ -0.53
ERBB3-214ENST00000550070 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 KARSQ15046 597 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 SAFBQ15424 915 aaKnown RBP eCLIP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 RILPL1Q5EBL4 403 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 TMCO4Q5TGY1 634 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 CC2D1AQ6P1N0 951 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 MAGEB6Q8N7X4 407 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 WASF1Q92558 559 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 UBXN6Q9BZV1 441 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 FOXP1Q9H334 677 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 POLR3GO15318 223 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 PRKAB2O43741 272 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 ATP2B1P20020 1258 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 TEX35Q5T0J7 233 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 GPR161Q8N6U8 529 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 DHX58Q96C10 678 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 MRPL44Q9H9J2 332 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 SNAP23O00161 211 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 TEX33O43247 280 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 UQCRFS1P1P0C7P4 283 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 RTN1Q16799 776 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 RRP12Q5JTH9 1297 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 MFSD6Q6ZSS7 791 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 CRACR2BQ8N4Y2 399 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
ERBB3-214ENST00000550070 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 CSRNP2Q9H175 543 aa11.73□□□□□ -0.53
ERBB3-214ENST00000550070 NID2Q14112 1375 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 ATP8B1O43520 1251 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 FGFR2P21802 821 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 TRIM22Q8IYM9 498 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 SPATA5Q8NB90 893 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 PARD6BQ9BYG5 372 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 KRT23Q9C075 422 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms