RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ZNF532Q9HCE3 1301 aa19.81■□□□□ 0.76
VPS29-207ENST00000549970 EN2P19622 333 aaPredicted RBP19.81■□□□□ 0.76
VPS29-207ENST00000549970 PRKCZQ05513 592 aa19.81■□□□□ 0.76
VPS29-207ENST00000549970 MTMR2Q13614 643 aa19.81■□□□□ 0.76
VPS29-207ENST00000549970 ANKRD13CQ8N6S4 541 aa19.81■□□□□ 0.76
VPS29-207ENST00000549970 WDR18Q9BV38 432 aa19.81■□□□□ 0.76
VPS29-207ENST00000549970 ZBTB21Q9ULJ3 1066 aa19.81■□□□□ 0.76
VPS29-207ENST00000549970 SMARCA5O60264 1052 aaPredicted RBP19.8■□□□□ 0.76
VPS29-207ENST00000549970 BACE1P56817 501 aa19.8■□□□□ 0.76
VPS29-207ENST00000549970 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
VPS29-207ENST00000549970 SH3D19Q5HYK7 790 aa19.8■□□□□ 0.76
VPS29-207ENST00000549970 LRRCC1Q9C099 1032 aa19.8■□□□□ 0.76
VPS29-207ENST00000549970 PAG1Q9NWQ8 432 aa19.8■□□□□ 0.76
VPS29-207ENST00000549970 SERPINB13Q9UIV8 391 aa19.8■□□□□ 0.76
VPS29-207ENST00000549970 NAV1Q8NEY1 1877 aa19.79■□□□□ 0.76
VPS29-207ENST00000549970 ATP5JP18859 108 aa19.79■□□□□ 0.76
VPS29-207ENST00000549970 TTC6Q86TZ1 520 aa19.79■□□□□ 0.76
VPS29-207ENST00000549970 CRNKL1Q9BZJ0 848 aaKnown RBP19.79■□□□□ 0.76
VPS29-207ENST00000549970 GINM1Q9NU53 330 aa19.79■□□□□ 0.76
VPS29-207ENST00000549970 TMOD4Q9NZQ9 345 aa19.79■□□□□ 0.76
VPS29-207ENST00000549970 GABRQQ9UN88 632 aa19.79■□□□□ 0.76
VPS29-207ENST00000549970 TCRBV5S4A2TA0A5A2 114 aa19.78■□□□□ 0.76
VPS29-207ENST00000549970 TNPO2O14787 897 aaKnown RBP19.78■□□□□ 0.76
VPS29-207ENST00000549970 GH2P01242 217 aa19.78■□□□□ 0.76
VPS29-207ENST00000549970 GRK4P32298 578 aa19.78■□□□□ 0.76
VPS29-207ENST00000549970 ASCC2Q9H1I8 757 aaPredicted RBP19.78■□□□□ 0.76
VPS29-207ENST00000549970 EHD4Q9H223 541 aa19.78■□□□□ 0.76
VPS29-207ENST00000549970 DDX60LQ5H9U9 1706 aaKnown RBP19.77■□□□□ 0.76
VPS29-207ENST00000549970 USP17L10C9JJH3 530 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 POLR3DP05423 398 aaPredicted RBP19.77■□□□□ 0.76
VPS29-207ENST00000549970 PLCD1P51178 756 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 MTFR1Q15390 333 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 FAM110CQ1W6H9 321 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 SLFNL1Q499Z3 407 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 LCORLQ8N3X6 602 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 SDR42E1Q8WUS8 393 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 HAUS7Q99871 368 aa19.77■□□□□ 0.76
VPS29-207ENST00000549970 C19orf81C9J6K1 198 aa19.76■□□□□ 0.75
VPS29-207ENST00000549970 GCLCP48506 637 aaPredicted RBP19.76■□□□□ 0.75
VPS29-207ENST00000549970 IRX3P78415 501 aaPredicted RBP19.76■□□□□ 0.75
VPS29-207ENST00000549970 PRPF38BQ5VTL8 546 aaKnown RBP19.76■□□□□ 0.75
VPS29-207ENST00000549970 TATDN1Q6P1N9 297 aa19.76■□□□□ 0.75
VPS29-207ENST00000549970 ARMT1Q9H993 441 aa19.76■□□□□ 0.75
VPS29-207ENST00000549970 MCM9Q9NXL9 1143 aa19.76■□□□□ 0.75
VPS29-207ENST00000549970 BIN2Q9UBW5 565 aaPredicted RBP19.76■□□□□ 0.75
VPS29-207ENST00000549970 DOCK3Q8IZD9 2030 aa19.75■□□□□ 0.75
VPS29-207ENST00000549970 ADD2P35612 726 aa19.75■□□□□ 0.75
VPS29-207ENST00000549970 FLT3LGP49771 235 aa19.75■□□□□ 0.75
VPS29-207ENST00000549970 RAB3GAP1Q15042 981 aa19.75■□□□□ 0.75
VPS29-207ENST00000549970 CERKLQ49MI3 558 aaPredicted RBP19.75■□□□□ 0.75
VPS29-207ENST00000549970 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.75■□□□□ 0.75
VPS29-207ENST00000549970 SHMT1P34896 483 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 EVX2Q03828 476 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 ABCB5Q2M3G0 1257 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 SLAIN1Q8ND83 568 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 COA7Q96BR5 231 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 DCTPP1Q9H773 170 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 DCP1AQ9NPI6 582 aaPredicted RBP19.74■□□□□ 0.75
VPS29-207ENST00000549970 TAOK2Q9UL54 1235 aa19.74■□□□□ 0.75
VPS29-207ENST00000549970 MYH7P12883 1935 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 ADCY3O60266 1144 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 MBD4O95243 580 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 CHGBP05060 677 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 HOXA7P31268 230 aaPredicted RBP19.73■□□□□ 0.75
VPS29-207ENST00000549970 UBXN2AP68543 259 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 ZYXQ15942 572 aaKnown RBP19.73■□□□□ 0.75
VPS29-207ENST00000549970 USP17L2Q6R6M4 530 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 P2RX7Q99572 595 aaKnown RBP19.73■□□□□ 0.75
VPS29-207ENST00000549970 FEZ1Q99689 392 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 CABP5Q9NP86 173 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 EMILIN3Q9NT22 766 aa19.73■□□□□ 0.75
VPS29-207ENST00000549970 PRKAB2O43741 272 aa19.72■□□□□ 0.75
VPS29-207ENST00000549970 ELNP15502 786 aa19.72■□□□□ 0.75
VPS29-207ENST00000549970 GABPAQ06546 454 aa19.72■□□□□ 0.75
VPS29-207ENST00000549970 ECHDC1Q9NTX5 307 aa19.72■□□□□ 0.75
VPS29-207ENST00000549970 CYP2D6P10635 497 aa19.71■□□□□ 0.75
VPS29-207ENST00000549970 CCL5P13501 91 aa19.71■□□□□ 0.75
VPS29-207ENST00000549970 RRP1P56182 461 aaKnown RBP19.71■□□□□ 0.75
VPS29-207ENST00000549970 HERVK_113P62684 666 aa19.71■□□□□ 0.75
VPS29-207ENST00000549970 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
VPS29-207ENST00000549970 RNF208Q9H0X6 261 aa19.71■□□□□ 0.75
VPS29-207ENST00000549970 BAZ2AQ9UIF9 1905 aaKnown RBP19.7■□□□□ 0.74
VPS29-207ENST00000549970 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
VPS29-207ENST00000549970 PEX10O60683 326 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 IRF5Q13568 498 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 TSHZ3Q63HK5 1081 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 GPATCH3Q96I76 525 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 MORF4L1Q9UBU8 362 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 PCDHB15Q9Y5E8 787 aa19.7■□□□□ 0.74
VPS29-207ENST00000549970 INHAP05111 366 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 GUCY1A2P33402 732 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 USP14P54578 494 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 SEPT2Q15019 361 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 ZSCAN25Q6NSZ9 544 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 SLC44A5Q8NCS7 719 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 PXYLP1Q8TE99 480 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 SHISA4Q96DD7 197 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 C12orf42Q96LP6 360 aa19.69■□□□□ 0.74
VPS29-207ENST00000549970 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms