RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 EHD4Q9H223 541 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 TDRD3Q9H7E2 651 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 BRD1O95696 1058 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 PRELPP51888 382 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 FAM47AQ5JRC9 791 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 COL13A1Q5TAT6 717 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 FKBP1CQ5VVH2 108 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 TNPO1Q92973 898 aaKnown RBP16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 SERPINB13Q9UIV8 391 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 HPS5Q9UPZ3 1129 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
CALCOCO1-214ENST00000549613 GOLGA8AA7E2F4 631 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 STX6O43752 255 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 RASA1P20936 1047 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 SYT1P21579 422 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-214ENST00000549613 EVX2Q03828 476 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 GABPAQ06546 454 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 NFIAQ12857 509 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 NFKBIBQ15653 356 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 ENAHQ8N8S7 591 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-214ENST00000549613 NSUN7Q8NE18 718 aaKnown RBP16■□□□□ 0.15
CALCOCO1-214ENST00000549613 NEDD1Q8NHV4 660 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 GPBP1L1Q9HC44 474 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-214ENST00000549613 PI4KBQ9UBF8 816 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZNF70Q9UC06 446 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-214ENST00000549613 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 PCDHAC2Q9Y5I4 1007 aa16■□□□□ 0.15
CALCOCO1-214ENST00000549613 DDX60LQ5H9U9 1706 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 CLEC17AQ6ZS10 378 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZSCAN29Q8IWY8 852 aaPredicted RBP15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZNF654Q8IZM8 581 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZBED3Q96IU2 234 aaPredicted RBP15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 SENP2Q9HC62 589 aa15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 NCOA5Q9HCD5 579 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-214ENST00000549613 COL2A1P02458 1487 aaPredicted RBP15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 JAK2O60674 1132 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 DDAH1O94760 285 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 CTDNEP1O95476 244 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 TCP10Q12799 353 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 RTN1Q16799 776 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 MICU3Q86XE3 530 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 SLC44A5Q8NCS7 719 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 RGS22Q8NE09 1264 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 FAM151AQ8WW52 585 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 MYOZ2Q9NPC6 264 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZDHHC9Q9Y397 364 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 NID2Q14112 1375 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZSCAN22P10073 491 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 PTMSP20962 102 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 TNNI2P48788 182 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 GMPSP49915 693 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 CACNB3P54284 484 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 NUP133Q8WUM0 1156 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 KAT14Q9H8E8 782 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 RBM28Q9NW13 759 aaKnown RBP15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 ATRNL1Q5VV63 1379 aa15.97■□□□□ 0.15
CALCOCO1-214ENST00000549613 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 H3BQV1 296 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 ADD1P35611 737 aaKnown RBP15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 PKP1Q13835 747 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 RAB11FIP4Q86YS3 637 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 ORC3Q9UBD5 711 aaPredicted RBP15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 CNOT7Q9UIV1 285 aaKnown RBP15.96■□□□□ 0.15
CALCOCO1-214ENST00000549613 CLRN2A0PK11 232 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 DDTLA6NHG4 134 aaPredicted RBP15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 TCP10L2B9ZVM9 353 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 H7C1D1 291 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 IFNAR1P17181 557 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 RXRAP19793 462 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 KIF5BP33176 963 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 MCM4P33991 863 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 SSRP1Q08945 709 aaKnown RBP15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 RCSD1Q6JBY9 416 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 METTL16Q86W50 562 aaKnown RBP15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 TNS4Q8IZW8 715 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 GPC2Q8N158 579 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 CTCFLQ8NI51 663 aaPredicted RBP15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 WASF1Q92558 559 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 MYL10Q9BUA6 226 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms