RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 TSR1Q2NL82 804 aaKnown RBP7.66□□□□□ -1.18
CASC18-202ENST00000548557 C9orf131Q5VYM1 1079 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 RASEFQ8IZ41 740 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 MIGA1Q8NAN2 632 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 CLEC11AQ9Y240 323 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 DAGLAQ9Y4D2 1042 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 BTDP43251 543 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 DPY19L2Q6NUT2 758 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
CASC18-202ENST00000548557 CCDC129Q6ZRS4 1044 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 PDLIM2Q96JY6 352 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 CRNKL1Q9BZJ0 848 aaKnown RBP7.66□□□□□ -1.18
CASC18-202ENST00000548557 NACAP1Q9BZK3 213 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 MAF1Q9H063 256 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 ARMT1Q9H993 441 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 ATP8A2Q9NTI2 1148 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 AATFQ9NY61 560 aaKnown RBP eCLIP7.66□□□□□ -1.18
CASC18-202ENST00000548557 CTNNA3Q9UI47 895 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 FRMD4BQ9Y2L6 1034 aa7.66□□□□□ -1.18
CASC18-202ENST00000548557 MYO5AQ9Y4I1 1855 aaKnown RBP7.65□□□□□ -1.18
CASC18-202ENST00000548557 WDR33Q9C0J8 1336 aaKnown RBP7.65□□□□□ -1.18
CASC18-202ENST00000548557 DICER1Q9UPY3 1922 aaKnown RBP7.65□□□□□ -1.18
CASC18-202ENST00000548557 ZNF646O15015 1829 aaPredicted RBP7.65□□□□□ -1.18
CASC18-202ENST00000548557 UTRNP46939 3433 aa7.65□□□□□ -1.18
CASC18-202ENST00000548557 ZNF500O60304 480 aaPredicted RBP7.65□□□□□ -1.18
CASC18-202ENST00000548557 SCNN1DP51172 638 aa7.65□□□□□ -1.18
CASC18-202ENST00000548557 ZNF280AP59817 542 aaPredicted RBP7.65□□□□□ -1.18
CASC18-202ENST00000548557 ALX1Q15699 326 aa7.65□□□□□ -1.18
CASC18-202ENST00000548557 LCORLQ8N3X6 602 aa7.65□□□□□ -1.18
CASC18-202ENST00000548557 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.18
CASC18-202ENST00000548557 ZMYM6O95789 1325 aa7.65□□□□□ -1.19
CASC18-202ENST00000548557 ZNF541Q9H0D2 1346 aa7.65□□□□□ -1.19
CASC18-202ENST00000548557 SBF1O95248 1867 aa7.65□□□□□ -1.19
CASC18-202ENST00000548557 CCDC194A0A1B0GVG4 234 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 SYCE3A1L190 88 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 AK2P54819 239 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 PTH1RQ03431 593 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 NECTIN1Q15223 517 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 CSPP1Q1MSJ5 1256 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 HS1BP3Q53T59 392 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 VPS53Q5VIR6 699 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 APOBEC3HQ6NTF7 200 aaKnown RBP7.64□□□□□ -1.19
CASC18-202ENST00000548557 ZSCAN30Q86W11 494 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 MSL3Q8N5Y2 521 aaKnown RBP7.64□□□□□ -1.19
CASC18-202ENST00000548557 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.64□□□□□ -1.19
CASC18-202ENST00000548557 GJA3Q9Y6H8 435 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 SLC4A4Q9Y6R1 1079 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 TCHHQ07283 1943 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 GSG1L2A8MUP6 293 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 GMPSP49915 693 aaPredicted RBP7.64□□□□□ -1.19
CASC18-202ENST00000548557 RBM5P52756 815 aaKnown RBP eCLIP7.64□□□□□ -1.19
CASC18-202ENST00000548557 DYNLL1P63167 89 aaKnown RBP7.64□□□□□ -1.19
CASC18-202ENST00000548557 DLGAP5Q15398 846 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 CFAP100Q494V2 611 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 RUFY3Q7L099 469 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 CACTIN-AS1Q8N1I8 211 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 ZNF513Q8N8E2 541 aaPredicted RBP7.64□□□□□ -1.19
CASC18-202ENST00000548557 GABBR1Q9UBS5 961 aa7.64□□□□□ -1.19
CASC18-202ENST00000548557 RBM8AQ9Y5S9 174 aaKnown RBP7.64□□□□□ -1.19
CASC18-202ENST00000548557 H7C1D1 291 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 FOXP2O15409 715 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 FGAP02671 866 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 ZKSCAN1P17029 563 aaPredicted RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 SETDB1Q15047 1291 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 IFNL3Q8IZI9 196 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 TMEM87AQ8NBN3 555 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 KCNB2Q92953 911 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 NAPBQ9H115 298 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 CNOT7Q9UIV1 285 aaKnown RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 LIMCH1Q9UPQ0 1083 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 RBM47A0AV96 593 aaKnown RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 MYO1BO43795 1136 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 USP5P45974 858 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 IMMTQ16891 758 aaKnown RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 TSGA10IPQ3SY00 556 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 CDC42EP5Q6NZY7 148 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 TEX11Q8IYF3 940 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 RBM46Q8TBY0 533 aaKnown RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 SH3RF3Q8TEJ3 882 aaPredicted RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 UBXN4Q92575 508 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 ZBED3Q96IU2 234 aaPredicted RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 IDI2Q9BXS1 227 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 MYOZ2Q9NPC6 264 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 DCP1AQ9NPI6 582 aaPredicted RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 USP40Q9NVE5 1235 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 GPRC5DQ9NZD1 345 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
CASC18-202ENST00000548557 IVNS1ABPQ9Y6Y0 642 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 MYH2Q9UKX2 1941 aa7.63□□□□□ -1.19
CASC18-202ENST00000548557 CARNS1A5YM72 827 aa7.62□□□□□ -1.19
CASC18-202ENST00000548557 GLTPD2A6NH11 291 aa7.62□□□□□ -1.19
CASC18-202ENST00000548557 PRKAB2O43741 272 aa7.62□□□□□ -1.19
CASC18-202ENST00000548557 GADD45BO75293 160 aaPredicted RBP7.62□□□□□ -1.19
CASC18-202ENST00000548557 DDNO94850 711 aaPredicted RBP7.62□□□□□ -1.19
CASC18-202ENST00000548557 TDO2P48775 406 aa7.62□□□□□ -1.19
CASC18-202ENST00000548557 FKBP1CQ5VVH2 108 aa7.62□□□□□ -1.19
CASC18-202ENST00000548557 SND1Q7KZF4 910 aaKnown RBP eCLIP7.62□□□□□ -1.19
CASC18-202ENST00000548557 MICALL2Q8IY33 904 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms