RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 GADL1Q6ZQY3 521 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 ANKRD23Q86SG2 305 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 ZFYVE28Q9HCC9 887 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 ZCCHC17Q9NP64 241 aaKnown RBP14.21□□□□□ -0.13
RAB5C-204ENST00000547517 CYP2D7A0A087X1C5 515 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 PDHXO00330 501 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 GH2P01242 217 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 SHMT1P34896 483 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 SPP2Q13103 211 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 PLEKHM2Q8IWE5 1019 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 AMOTL1Q8IY63 956 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 SLC44A5Q8NCS7 719 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 ZNF280CQ8ND82 737 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 EVI5LQ96CN4 794 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 STRBPQ96SI9 672 aaKnown RBP14.2□□□□□ -0.14
RAB5C-204ENST00000547517 SEC62Q99442 399 aaKnown RBP14.2□□□□□ -0.14
RAB5C-204ENST00000547517 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 AS3MTQ9HBK9 375 aa14.2□□□□□ -0.14
RAB5C-204ENST00000547517 LOC285556D6RIA3 1793 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 TRIM6-TRIM34B2RNG4 842 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 USP17L12C9JPN9 530 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 USP17L21D6R901 530 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 GABPAQ06546 454 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 MTMR2Q13614 643 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 CERKLQ49MI3 558 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-204ENST00000547517 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 GPAT2Q6NUI2 795 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 FASTKD5Q7L8L6 764 aaKnown RBP14.19□□□□□ -0.14
RAB5C-204ENST00000547517 CTU1Q7Z7A3 348 aaKnown RBP14.19□□□□□ -0.14
RAB5C-204ENST00000547517 DYNLL2Q96FJ2 89 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 MCOLN1Q9GZU1 580 aa14.19□□□□□ -0.14
RAB5C-204ENST00000547517 ARPP21Q9UBL0 812 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-204ENST00000547517 SMIM22K7EJ46 135 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 TDO2P48775 406 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 HMGCS2P54868 508 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 ABCB5Q2M3G0 1257 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 C12orf60Q5U649 245 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 RILPL2Q969X0 211 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 PARK7Q99497 189 aaKnown RBP14.18□□□□□ -0.14
RAB5C-204ENST00000547517 EPB41L4AQ9HCS5 686 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-204ENST00000547517 GINM1Q9NU53 330 aa14.18□□□□□ -0.14
RAB5C-204ENST00000547517 GSG1L2A8MUP6 293 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
RAB5C-204ENST00000547517 TLR2O60603 784 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 APPP05067 770 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 CYP2C8P10632 490 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 GNAT2P19087 354 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 SP3Q02447 781 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 TREML2Q5T2D2 321 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 CCDC129Q6ZRS4 1044 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 CD99L2Q8TCZ2 262 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 FEZ1Q99689 392 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 WDR18Q9BV38 432 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 OSBPL3Q9H4L5 887 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 SWAP70Q9UH65 585 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 AGTPBP1Q9UPW5 1226 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 MYH8P13535 1937 aa14.17□□□□□ -0.14
RAB5C-204ENST00000547517 PDE4AP27815 886 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 PROCA1Q8NCQ7 364 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-204ENST00000547517 ERO1AQ96HE7 468 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 ABHD8Q96I13 439 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 CABP5Q9NP86 173 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 CPA4Q9UI42 421 aa14.16□□□□□ -0.14
RAB5C-204ENST00000547517 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 A0A0D9SFI3 127 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 MINDY4BA8MYZ0 360 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 CDK8P49336 464 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 BACE1P56817 501 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
RAB5C-204ENST00000547517 SH3D19Q5HYK7 790 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 C16orf86Q6ZW13 317 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 STK11IPQ8N1F8 1099 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 SMCR8Q8TEV9 937 aaPredicted RBP14.15□□□□□ -0.14
RAB5C-204ENST00000547517 FAM227BQ96M60 508 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 SLC45A1Q9Y2W3 748 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 TRIM17Q9Y577 477 aa14.15□□□□□ -0.14
RAB5C-204ENST00000547517 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 ZSWIM8A7E2V4 1837 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
RAB5C-204ENST00000547517 USP17L10C9JJH3 530 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 ECM2O94769 699 aaPredicted RBP14.14□□□□□ -0.15
RAB5C-204ENST00000547517 AKR1B1P15121 316 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 GUCY1A2P33402 732 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 NMIQ13287 307 aaPredicted RBP14.14□□□□□ -0.15
RAB5C-204ENST00000547517 SEPT2Q15019 361 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 SBK1Q52WX2 424 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 NACAP1Q9BZK3 213 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 PNMA3Q9UL41 463 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 TAOK2Q9UL54 1235 aa14.14□□□□□ -0.15
RAB5C-204ENST00000547517 C19orf81C9J6K1 198 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 CAP1Q01518 475 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 TMEM179Q6ZVK1 233 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 OTOP1Q7RTM1 612 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms