RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 ANKIB1Q9P2G1 1089 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 FEZ1Q99689 392 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 ARGLU1Q9NWB6 273 aaPredicted RBP11.12□□□□□ -0.63
DDX11-229ENST00000545668 JAG2Q9Y219 1238 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 DYNLL1P63167 89 aaKnown RBP11.12□□□□□ -0.63
DDX11-229ENST00000545668 GPS2Q13227 327 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 E2F4Q16254 413 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 SSRP1Q08945 709 aaKnown RBP11.12□□□□□ -0.63
DDX11-229ENST00000545668 SAFBQ15424 915 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDX11-229ENST00000545668 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 ZNF397Q8NF99 534 aaPredicted RBP11.12□□□□□ -0.63
DDX11-229ENST00000545668 RTEL1Q9NZ71 1219 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 AFF2P51816 1311 aa11.12□□□□□ -0.63
DDX11-229ENST00000545668 COL5A3P25940 1745 aaPredicted RBP11.11□□□□□ -0.63
DDX11-229ENST00000545668 FBXO33Q7Z6M2 555 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 ESR2Q92731 530 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 COL4A1P02462 1669 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 SEMA3EO15041 775 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 LMAN1P49257 510 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 GNG11P61952 73 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
DDX11-229ENST00000545668 KRT40Q6A162 431 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 TMCO3Q6UWJ1 677 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 TMTC2Q8N394 836 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 CNBD1Q8NA66 436 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 ARAP2Q8WZ64 1704 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
DDX11-229ENST00000545668 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
DDX11-229ENST00000545668 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 LINC00301Q8NCQ3 95 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 RASSF8Q8NHQ8 419 aa11.11□□□□□ -0.63
DDX11-229ENST00000545668 IQCB1Q15051 598 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 RTN1Q16799 776 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 RIOK1Q9BRS2 568 aaKnown RBP11.1□□□□□ -0.63
DDX11-229ENST00000545668 DEF6Q9H4E7 631 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 FANCCQ00597 558 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
DDX11-229ENST00000545668 MECOMQ03112 1051 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 PNOCQ13519 176 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 FBXO38Q6PIJ6 1188 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 CNPY4Q8N129 248 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 AATFQ9NY61 560 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDX11-229ENST00000545668 TAF1P21675 1872 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 PRDM1O75626 825 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 NFIXQ14938 502 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 KARSQ15046 597 aaKnown RBP11.1□□□□□ -0.63
DDX11-229ENST00000545668 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 CMTR1Q8N1G2 835 aaKnown RBP11.1□□□□□ -0.63
DDX11-229ENST00000545668 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
DDX11-229ENST00000545668 BCORQ6W2J9 1755 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
DDX11-229ENST00000545668 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 NTRK3Q16288 839 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 ANO1Q5XXA6 986 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 WASF1Q92558 559 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 CCDC34Q96HJ3 373 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 FAM217BQ9NTX9 383 aaPredicted RBP11.09□□□□□ -0.63
DDX11-229ENST00000545668 TRPC5Q9UL62 973 aaPredicted RBP11.09□□□□□ -0.63
DDX11-229ENST00000545668 COL1A1P02452 1464 aaPredicted RBP11.09□□□□□ -0.63
DDX11-229ENST00000545668 YEATS4O95619 227 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 PFKFB1P16118 471 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 PRDX5P30044 214 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 RBM43Q6ZSC3 357 aaKnown RBP11.09□□□□□ -0.63
DDX11-229ENST00000545668 TXNRD3Q86VQ6 643 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 NSUN4Q96CB9 384 aaKnown RBP11.09□□□□□ -0.63
DDX11-229ENST00000545668 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
DDX11-229ENST00000545668 USP17L12C9JPN9 530 aa11.08□□□□□ -0.63
DDX11-229ENST00000545668 USP17L21D6R901 530 aa11.08□□□□□ -0.63
DDX11-229ENST00000545668 SMIM22K7EJ46 135 aa11.08□□□□□ -0.63
DDX11-229ENST00000545668 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.63
DDX11-229ENST00000545668 TRMT44Q8IYL2 757 aaKnown RBP11.08□□□□□ -0.63
DDX11-229ENST00000545668 CRNKL1Q9BZJ0 848 aaKnown RBP11.08□□□□□ -0.63
DDX11-229ENST00000545668 EPC1Q9H2F5 836 aa11.08□□□□□ -0.63
DDX11-229ENST00000545668 TNKSO95271 1327 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 LAMB2P55268 1798 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 TM4SF1P30408 202 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 HSPA1LP34931 641 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 GYS2P54840 703 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 HNRNPH2P55795 449 aaKnown RBP11.08□□□□□ -0.64
DDX11-229ENST00000545668 STX17P56962 302 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
DDX11-229ENST00000545668 DHX40Q8IX18 779 aaKnown RBP11.08□□□□□ -0.64
DDX11-229ENST00000545668 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms