RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 C16orf86Q6ZW13 317 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 BRI3BPQ8WY22 251 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 PTPN18Q99952 460 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 RNF186Q9NXI6 227 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.9■■□□□ 1.26
DDX55-211ENST00000544429 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.9■■□□□ 1.26
DDX55-211ENST00000544429 SWAP70Q9UH65 585 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 IGF2BP3O00425 579 aaKnown RBP eCLIP22.89■■□□□ 1.25
DDX55-211ENST00000544429 CXCL11O14625 94 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 ASNSP08243 561 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 VPS53Q5VIR6 699 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 IFNL1Q8IU54 200 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 CFHR5Q9BXR6 569 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 TRIM34Q9BYJ4 488 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 TBC1D2Q9BYX2 928 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 ZBTB21Q9ULJ3 1066 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 ZHX2Q9Y6X8 837 aa22.89■■□□□ 1.25
DDX55-211ENST00000544429 GREB1LQ9C091 1923 aaPredicted RBP22.88■■□□□ 1.25
DDX55-211ENST00000544429 CCDC171Q6TFL3 1326 aa22.88■■□□□ 1.25
DDX55-211ENST00000544429 SNAPC2Q13487 334 aa22.88■■□□□ 1.25
DDX55-211ENST00000544429 ALX1Q15699 326 aa22.88■■□□□ 1.25
DDX55-211ENST00000544429 SLC44A5Q8NCS7 719 aa22.88■■□□□ 1.25
DDX55-211ENST00000544429 DYNLL2Q96FJ2 89 aa22.88■■□□□ 1.25
DDX55-211ENST00000544429 LOC285556D6RIA3 1793 aa22.88■■□□□ 1.25
DDX55-211ENST00000544429 ZMYM6O95789 1325 aa22.87■■□□□ 1.25
DDX55-211ENST00000544429 CERKLQ49MI3 558 aaPredicted RBP22.87■■□□□ 1.25
DDX55-211ENST00000544429 CCDC84Q86UT8 332 aaPredicted RBP22.87■■□□□ 1.25
DDX55-211ENST00000544429 AMOTL1Q8IY63 956 aa22.87■■□□□ 1.25
DDX55-211ENST00000544429 WDR18Q9BV38 432 aa22.87■■□□□ 1.25
DDX55-211ENST00000544429 NACAP1Q9BZK3 213 aa22.87■■□□□ 1.25
DDX55-211ENST00000544429 CCL15-CCL14A0A0B4J2E2 113 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 A0A0G2JLL6 359 aaPredicted RBP22.86■■□□□ 1.25
DDX55-211ENST00000544429 USP17L5A8MUK1 530 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 GDF11O95390 407 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 APPP05067 770 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 HSPD1P10809 573 aaKnown RBP22.86■■□□□ 1.25
DDX55-211ENST00000544429 CETPP11597 493 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 TDO2P48775 406 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 CDK8P49336 464 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 CCL15Q16663 113 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 CWC27Q6UX04 472 aaKnown RBP22.86■■□□□ 1.25
DDX55-211ENST00000544429 PRRT2Q7Z6L0 340 aaPredicted RBP22.86■■□□□ 1.25
DDX55-211ENST00000544429 BEGAINQ9BUH8 593 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 IL25Q9H293 177 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 DIAPH3Q9NSV4 1193 aa22.86■■□□□ 1.25
DDX55-211ENST00000544429 GH2P01242 217 aa22.85■■□□□ 1.25
DDX55-211ENST00000544429 HSPA8P11142 646 aaKnown RBP22.85■■□□□ 1.25
DDX55-211ENST00000544429 CHMLP26374 656 aa22.85■■□□□ 1.25
DDX55-211ENST00000544429 GUCY1A2P33402 732 aa22.85■■□□□ 1.25
DDX55-211ENST00000544429 BMP2KLQ5H9B9 411 aa22.85■■□□□ 1.25
DDX55-211ENST00000544429 ZNF280CQ8ND82 737 aa22.85■■□□□ 1.25
DDX55-211ENST00000544429 ZCCHC17Q9NP64 241 aaKnown RBP22.85■■□□□ 1.25
DDX55-211ENST00000544429 TRPA1O75762 1119 aa22.84■■□□□ 1.25
DDX55-211ENST00000544429 ALDH1A1P00352 501 aa22.84■■□□□ 1.25
DDX55-211ENST00000544429 CTCFP49711 727 aaPredicted RBP22.84■■□□□ 1.25
DDX55-211ENST00000544429 ABCB5Q2M3G0 1257 aa22.84■■□□□ 1.25
DDX55-211ENST00000544429 NAPBQ9H115 298 aa22.84■■□□□ 1.25
DDX55-211ENST00000544429 LAMA4Q16363 1823 aa22.84■■□□□ 1.25
DDX55-211ENST00000544429 FGAP02671 866 aa22.83■■□□□ 1.25
DDX55-211ENST00000544429 MFAP1P55081 439 aaKnown RBP22.83■■□□□ 1.25
DDX55-211ENST00000544429 SH3D19Q5HYK7 790 aa22.83■■□□□ 1.25
DDX55-211ENST00000544429 FAM43AQ8N2R8 423 aa22.83■■□□□ 1.25
DDX55-211ENST00000544429 CCDC17Q96LX7 622 aa22.83■■□□□ 1.25
DDX55-211ENST00000544429 ANAPC4Q9UJX5 808 aa22.83■■□□□ 1.25
DDX55-211ENST00000544429 RAD50Q92878 1312 aa22.82■■□□□ 1.24
DDX55-211ENST00000544429 MINDY4BA8MYZ0 360 aa22.82■■□□□ 1.24
DDX55-211ENST00000544429 BTBD19C9JJ37 291 aa22.82■■□□□ 1.24
DDX55-211ENST00000544429 SPP2Q13103 211 aa22.82■■□□□ 1.24
DDX55-211ENST00000544429 GPAT2Q6NUI2 795 aa22.82■■□□□ 1.24
DDX55-211ENST00000544429 AS3MTQ9HBK9 375 aa22.82■■□□□ 1.24
DDX55-211ENST00000544429 TRIM75PA6NK02 468 aa22.81■■□□□ 1.24
DDX55-211ENST00000544429 RASA1P20936 1047 aa22.81■■□□□ 1.24
DDX55-211ENST00000544429 PPARAQ07869 468 aa22.81■■□□□ 1.24
DDX55-211ENST00000544429 NOM1Q5C9Z4 860 aaKnown RBP22.81■■□□□ 1.24
DDX55-211ENST00000544429 ANKRD23Q86SG2 305 aa22.81■■□□□ 1.24
DDX55-211ENST00000544429 AKR1B1P15121 316 aa22.8■■□□□ 1.24
DDX55-211ENST00000544429 OTUD7BQ6GQQ9 843 aa22.8■■□□□ 1.24
DDX55-211ENST00000544429 TMEM179Q6ZVK1 233 aa22.8■■□□□ 1.24
DDX55-211ENST00000544429 DSCC1Q9BVC3 393 aa22.8■■□□□ 1.24
DDX55-211ENST00000544429 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
DDX55-211ENST00000544429 R3HDMLQ9H3Y0 253 aa22.8■■□□□ 1.24
DDX55-211ENST00000544429 TSKSQ9UJT2 592 aa22.8■■□□□ 1.24
DDX55-211ENST00000544429 FGRP09769 529 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 BACE1P56817 501 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 SEPT2Q15019 361 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 FASTKD5Q7L8L6 764 aaKnown RBP22.79■■□□□ 1.24
DDX55-211ENST00000544429 PROCA1Q8NCQ7 364 aaPredicted RBP22.79■■□□□ 1.24
DDX55-211ENST00000544429 CABP5Q9NP86 173 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 PRDM10Q9NQV6 1147 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.79■■□□□ 1.24
DDX55-211ENST00000544429 SLC45A1Q9Y2W3 748 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 CASP8AP2Q9UKL3 1982 aa22.79■■□□□ 1.24
DDX55-211ENST00000544429 SGSM2O43147 1006 aa22.78■■□□□ 1.24
DDX55-211ENST00000544429 LBX1P52954 281 aa22.78■■□□□ 1.24
DDX55-211ENST00000544429 SIAH1Q8IUQ4 282 aa22.78■■□□□ 1.24
DDX55-211ENST00000544429 TACC3Q9Y6A5 838 aa22.78■■□□□ 1.24
DDX55-211ENST00000544429 C19orf81C9J6K1 198 aa22.77■■□□□ 1.24
DDX55-211ENST00000544429 USP17L10C9JJH3 530 aa22.77■■□□□ 1.24
DDX55-211ENST00000544429 TBC1D8O95759 1140 aa22.77■■□□□ 1.24
DDX55-211ENST00000544429 CRHR2Q13324 411 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms