RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ZNF532Q9HCE3 1301 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 BAZ2AQ9UIF9 1905 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TCRBV5S4A2TA0A5A2 114 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TLR2O60603 784 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 MOGSQ13724 837 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 RRP1BQ14684 758 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ARHGEF6Q15052 776 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ZSCAN25Q6NSZ9 544 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TTC6Q86TZ1 520 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GPATCH3Q96I76 525 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TBC1D2Q9BYX2 928 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CRNKL1Q9BZJ0 848 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 MYH8P13535 1937 aa11.77□□□□□ -0.53
TNFRSF1A-214ENST00000543048 MGAMO43451 1857 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 DOCK3Q8IZD9 2030 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PDHXO00330 501 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ADD2P35612 726 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GPAT2Q6NUI2 795 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GINM1Q9NU53 330 aa11.76□□□□□ -0.53
TNFRSF1A-214ENST00000543048 NAV1Q8NEY1 1877 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ASNSP08243 561 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SPP2Q13103 211 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 UBE3CQ15386 1083 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ANKRD45Q5TZF3 282 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GADL1Q6ZQY3 521 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ZNF280CQ8ND82 737 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TRIM75PA6NK02 468 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ERC2O15083 957 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PSEN1P49768 467 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 KIF22Q14807 665 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 OTOP1Q7RTM1 612 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 LCORLQ8N3X6 602 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 WDR18Q9BV38 432 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 EHD4Q9H223 541 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 RWDD1Q9H446 243 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ARMT1Q9H993 441 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ATP8A2Q9NTI2 1148 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SERPINB13Q9UIV8 391 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TTC41PQ6P2S7 1318 aa11.74□□□□□ -0.53
TNFRSF1A-214ENST00000543048 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 MBD4O95243 580 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PLCD1P51178 756 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 KBTBD3Q8NAB2 608 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PROCA1Q8NCQ7 364 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PARK7Q99497 189 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 MCM9Q9NXL9 1143 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CPA4Q9UI42 421 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SUPT16HQ9Y5B9 1047 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-214ENST00000543048 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 RNF113AO15541 343 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GDF11O95390 407 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CHGBP05060 677 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 JAG1P78504 1218 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 LACTBP83111 547 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TSHZ3Q63HK5 1081 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SDR42E1Q8WUS8 393 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 AGTPBP1Q9UPW5 1226 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
TNFRSF1A-214ENST00000543048 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PRKAB2O43741 272 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 GNRH1P01148 92 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ZFYP08048 801 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CYP2C8P10632 490 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 MX1P20591 662 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 OSBPP22059 807 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 RGS19P49795 217 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 HMGCS2P54868 508 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 BACE1P56817 501 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CAP1Q01518 475 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 LRRFIP1Q32MZ4 808 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms