RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 FCHSD1Q86WN1 690 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 NBPF5PQ86XG9 351 aaPredicted RBP9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 GOLPH3LQ9H4A5 285 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 TAB2Q9NYJ8 693 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 SIGLEC1Q9BZZ2 1709 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 PIK3C2BO00750 1634 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 DLC1Q96QB1 1528 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 SLF2Q8IX21 1173 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 SLF1Q9BQI6 1058 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 GREM2Q9H772 168 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 AXIN2Q9Y2T1 843 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 USP32Q8NFA0 1604 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 TMCO5BA8MYB1 307 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 PLCD1P51178 756 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 SPATA1Q5VX52 437 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 USPL1Q5W0Q7 1092 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 FBXO38Q6PIJ6 1188 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 C6orf50Q9HD87 102 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 DENND2AQ9ULE3 1009 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 HSF2BPO75031 334 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 GNA11P29992 359 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 BRD3Q15059 726 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 PTPN21Q16825 1174 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 PARP10Q53GL7 1025 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 NBPF11Q86T75 865 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 C10orf67Q8IYJ2 551 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 CSGALNACT2Q8N6G5 542 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 CCDC51Q96ER9 411 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 SPAG5Q96R06 1193 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 DDX41Q9UJV9 622 aaKnown RBP9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 ADD2P35612 726 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 RBM5P52756 815 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 PPARAQ07869 468 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 GOLGA8FQ08AF8 430 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 GOLGA8DPQ0D2H9 430 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 IQCB1Q15051 598 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 LONRF3Q496Y0 759 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 BLZF1Q9H2G9 400 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 ANKARQ7Z5J8 1434 aa9.24□□□□□ -0.93
PRKAB1-207ENST00000542698 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 OPA1O60313 960 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 ERCC5P28715 1186 aaPredicted RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 OR8K1Q8NGG5 319 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 RABGGTAQ92696 567 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 OSBPL5Q9H0X9 879 aaPredicted RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 FOXP1Q9H334 677 aaPredicted RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 BCCIPQ9P287 314 aaKnown RBP eCLIP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 TAF6LQ9Y6J9 622 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 MACROD2A1Z1Q3 448 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 GSTO1P78417 241 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 SETDB2Q96T68 719 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 NOC4LQ9BVI4 516 aaKnown RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 ZSWIM5Q9P217 1185 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 USP27XA6NNY8 438 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 TOM1O60784 492 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 IFNAR1P17181 557 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 PDE4DQ08499 809 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 IFFO1Q0D2I5 559 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 LETM2Q2VYF4 491 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 KRT79Q5XKE5 535 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 STOX1Q6ZVD7 989 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 MICALCLQ6ZW33 695 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 MAATS1Q7Z4T9 603 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 TAX1BP1Q86VP1 789 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 CRACR2BQ8N4Y2 399 aaPredicted RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 ENOX1Q8TC92 643 aaKnown RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 BBXQ8WY36 941 aaPredicted RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 ARHGEF28Q8N1W1 1705 aaKnown RBP9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 TNKSO95271 1327 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 PHLPP2Q6ZVD8 1323 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 CDC42BPGQ6DT37 1551 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 NRKQ7Z2Y5 1582 aa9.23□□□□□ -0.93
PRKAB1-207ENST00000542698 EBAG9O00559 213 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 CYP27B1O15528 508 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 DDB1Q16531 1140 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 VSTM4Q8IW00 320 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 NELFBQ8WX92 580 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 NCAPD2Q15021 1401 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 USP17L21D6R901 530 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 C6orf229H3BNL8 230 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 CHGBP05060 677 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 PPP1R2P41236 205 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 BCAMP50895 628 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 VAV2P52735 878 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 RNF187Q5TA31 235 aaPredicted RBP9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 SDR42E1Q8WUS8 393 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 GSDMAQ96QA5 445 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 BTG4Q9NY30 223 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms