RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 BMP6P22004 513 aa16.99■□□□□ 0.31
DDX55-209ENST00000542286 NLRP12P59046 1061 aa16.99■□□□□ 0.31
DDX55-209ENST00000542286 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.99■□□□□ 0.31
DDX55-209ENST00000542286 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
DDX55-209ENST00000542286 HSD3B7Q9H2F3 369 aa16.99■□□□□ 0.31
DDX55-209ENST00000542286 DDX41Q9UJV9 622 aaKnown RBP16.99■□□□□ 0.31
DDX55-209ENST00000542286 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
DDX55-209ENST00000542286 HPSEQ9Y251 543 aa16.99■□□□□ 0.31
DDX55-209ENST00000542286 V9GY48 417 aaPredicted RBP16.99■□□□□ 0.31
DDX55-209ENST00000542286 AHDC1Q5TGY3 1603 aaPredicted RBP16.98■□□□□ 0.31
DDX55-209ENST00000542286 TNNT1P13805 278 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 SYCP1Q15431 976 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 SEC23AQ15436 765 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 TRIM22Q8IYM9 498 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 PCDHA5Q9Y5H7 936 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 GNAT2P19087 354 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 CCZ1BP86790 482 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 CCZ1P86791 482 aaPredicted RBP16.98■□□□□ 0.31
DDX55-209ENST00000542286 GRIK5Q16478 980 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 RESP18Q5W5W9 173 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
DDX55-209ENST00000542286 NAT10Q9H0A0 1025 aaKnown RBP16.98■□□□□ 0.31
DDX55-209ENST00000542286 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
DDX55-209ENST00000542286 POLR2DO15514 142 aaKnown RBP16.97■□□□□ 0.31
DDX55-209ENST00000542286 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
DDX55-209ENST00000542286 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
DDX55-209ENST00000542286 CAVIN2O95810 425 aa16.97■□□□□ 0.31
DDX55-209ENST00000542286 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
DDX55-209ENST00000542286 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
DDX55-209ENST00000542286 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
DDX55-209ENST00000542286 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
DDX55-209ENST00000542286 COBLO75128 1261 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 ESR2Q92731 530 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
DDX55-209ENST00000542286 NSUN4Q96CB9 384 aaKnown RBP16.96■□□□□ 0.31
DDX55-209ENST00000542286 ZSCAN10Q96SZ4 725 aaPredicted RBP16.96■□□□□ 0.31
DDX55-209ENST00000542286 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 CACNA1SQ13698 1873 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 TMEM232C9JQI7 657 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 PKN1Q16512 942 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
DDX55-209ENST00000542286 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 STAMQ92783 540 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 BCORQ6W2J9 1755 aa16.96■□□□□ 0.31
DDX55-209ENST00000542286 PPP6R2O75170 966 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX55-209ENST00000542286 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 KRI1Q8N9T8 703 aaKnown RBP16.95■□□□□ 0.3
DDX55-209ENST00000542286 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX55-209ENST00000542286 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
DDX55-209ENST00000542286 V9GYY5 206 aaPredicted RBP16.95■□□□□ 0.3
DDX55-209ENST00000542286 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 CDC25BP30305 580 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 KRBA2Q6ZNG9 492 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 FBXO2Q9UK22 296 aaPredicted RBP16.95■□□□□ 0.3
DDX55-209ENST00000542286 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
DDX55-209ENST00000542286 DEXIO95424 95 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 NFIXQ14938 502 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 ARHGEF1Q92888 912 aaKnown RBP16.94■□□□□ 0.3
DDX55-209ENST00000542286 DYNLL2Q96FJ2 89 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 EPSTI1Q96J88 318 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 RNF41Q9H4P4 317 aaPredicted RBP16.94■□□□□ 0.3
DDX55-209ENST00000542286 A0A087X0B3 334 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 VGLL3A8MV65 326 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 ZPR1O75312 459 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 FANCCQ00597 558 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 CCDC112Q8NEF3 446 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
DDX55-209ENST00000542286 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
DDX55-209ENST00000542286 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 KIF18AQ8NI77 898 aa16.94■□□□□ 0.3
DDX55-209ENST00000542286 STK36Q9NRP7 1315 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 CUTAO60888 179 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 TERF2Q15554 542 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 ZNF174Q15697 407 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 FBXO33Q7Z6M2 555 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 DCP1AQ9NPI6 582 aaPredicted RBP16.93■□□□□ 0.3
DDX55-209ENST00000542286 AFMP43652 599 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 FMR1Q06787 632 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDX55-209ENST00000542286 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 PAXBP1Q9Y5B6 917 aa16.93■□□□□ 0.3
DDX55-209ENST00000542286 TIAM2Q8IVF5 1701 aa16.92■□□□□ 0.3
DDX55-209ENST00000542286 RBM6P78332 1123 aaKnown RBP16.92■□□□□ 0.3
DDX55-209ENST00000542286 FUT2Q10981 343 aa16.92■□□□□ 0.3
DDX55-209ENST00000542286 TROAPQ12815 778 aa16.92■□□□□ 0.3
DDX55-209ENST00000542286 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
DDX55-209ENST00000542286 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
DDX55-209ENST00000542286 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
DDX55-209ENST00000542286 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms