RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 USP28Q96RU2 1077 aa25.37■■□□□ 1.65
NHLRC4-202ENST00000540585 ZKSCAN3Q9BRR0 538 aa25.37■■□□□ 1.65
NHLRC4-202ENST00000540585 FTOQ9C0B1 505 aaKnown RBP eCLIP25.37■■□□□ 1.65
NHLRC4-202ENST00000540585 TAOK3Q9H2K8 898 aa25.37■■□□□ 1.65
NHLRC4-202ENST00000540585 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
NHLRC4-202ENST00000540585 TPM3P06753 285 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 SYNE3Q6ZMZ3 975 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 DZIP1Q86YF9 867 aaKnown RBP25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 ESR2Q92731 530 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 CRNKL1Q9BZJ0 848 aaKnown RBP25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 ZC3H12CQ9C0D7 883 aaKnown RBP25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 FAM217BQ9NTX9 383 aaPredicted RBP25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 RCOR1Q9UKL0 485 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 NTRK3Q16288 839 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 TDRD7Q8NHU6 1098 aaKnown RBP25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 WDR66Q8TBY9 1149 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 BICD2Q8TD16 824 aa25.36■■□□□ 1.65
NHLRC4-202ENST00000540585 LTBP3Q9NS15 1303 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 RASSF7Q02833 373 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 UBAC1Q9BSL1 405 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 NUP62CLQ9H1M0 184 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 LAMB1P07942 1786 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 CYP2D7A0A087X1C5 515 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 SMIM22K7EJ46 135 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 AOC3Q16853 763 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 CTR9Q6PD62 1173 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 ARHGAP27Q6ZUM4 889 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 TMTC2Q8N394 836 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 PHKBQ93100 1093 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 ALG1Q9BT22 464 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 GJB4Q9NTQ9 266 aa25.35■■□□□ 1.65
NHLRC4-202ENST00000540585 BRAPQ7Z569 592 aa25.34■■□□□ 1.65
NHLRC4-202ENST00000540585 FUCA2Q9BTY2 467 aa25.34■■□□□ 1.65
NHLRC4-202ENST00000540585 DDX19AQ9NUU7 478 aaKnown RBP25.34■■□□□ 1.65
NHLRC4-202ENST00000540585 DACT1Q9NYF0 836 aa25.34■■□□□ 1.65
NHLRC4-202ENST00000540585 COL4A5P29400 1685 aa25.34■■□□□ 1.65
NHLRC4-202ENST00000540585 RANBP6O60518 1105 aaKnown RBP25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 IGSF3O75054 1194 aa25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 PCP11498 1178 aaKnown RBP25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 IARSP41252 1262 aaKnown RBP25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 SYCP1Q15431 976 aa25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 GPR162Q16538 588 aa25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 STK36Q9NRP7 1315 aa25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 PPIP5K2O43314 1243 aa25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 C17orf53Q8N3J3 647 aaPredicted RBP25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 AIFM3Q96NN9 605 aa25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 DCP1AQ9NPI6 582 aaPredicted RBP25.33■■□□□ 1.65
NHLRC4-202ENST00000540585 UTRNP46939 3433 aa25.33■■□□□ 1.64
NHLRC4-202ENST00000540585 LDHBP07195 334 aaKnown RBP25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 PRELPP51888 382 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 RCAN1P53805 252 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 KIF23Q02241 960 aaPredicted RBP25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 ATP8A2Q9NTI2 1148 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 USP17L12C9JPN9 530 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 USP17L21D6R901 530 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 RIOK3O14730 519 aaKnown RBP25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 FGRP09769 529 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 RTN1Q16799 776 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 DOK7Q18PE1 504 aa25.32■■□□□ 1.64
NHLRC4-202ENST00000540585 TNKSO95271 1327 aa25.31■■□□□ 1.64
NHLRC4-202ENST00000540585 SEC23AQ15436 765 aa25.31■■□□□ 1.64
NHLRC4-202ENST00000540585 MAP3K11Q16584 847 aa25.31■■□□□ 1.64
NHLRC4-202ENST00000540585 VPS33BQ9H267 617 aa25.31■■□□□ 1.64
NHLRC4-202ENST00000540585 CD209Q9NNX6 404 aa25.31■■□□□ 1.64
NHLRC4-202ENST00000540585 RTEL1Q9NZ71 1219 aa25.31■■□□□ 1.64
NHLRC4-202ENST00000540585 SBF1O95248 1867 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 KIF28PB7ZC32 967 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 FMNL1O95466 1100 aaPredicted RBP25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 ZNF654Q8IZM8 581 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 CLSTN2Q9H4D0 955 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 MYH2Q9UKX2 1941 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 NR1I2O75469 434 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 POLR3DP05423 398 aaPredicted RBP25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 IFNAR1P17181 557 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 SSRP1Q08945 709 aaKnown RBP25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 SLC26A6Q9BXS9 759 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 COA1Q9GZY4 146 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 TNMDQ9H2S6 317 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 DBNDD1Q9H9R9 158 aa25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 ARPP21Q9UBL0 812 aaPredicted RBP25.3■■□□□ 1.64
NHLRC4-202ENST00000540585 IL1R1P14778 569 aa25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 CAMK4Q16566 473 aa25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 MYSM1Q5VVJ2 828 aa25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 KRT40Q6A162 431 aa25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 LARGE2Q8N3Y3 721 aa25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 ZSCAN10Q96SZ4 725 aaPredicted RBP25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 OGFRQ9NZT2 677 aa25.29■■□□□ 1.64
NHLRC4-202ENST00000540585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 CCDC196A0A1B0GTZ2 297 aa25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 PRDM1O75626 825 aa25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 CCDC192P0DO97 292 aa25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 GSTO1P78417 241 aa25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 ENAHQ8N8S7 591 aaPredicted RBP25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 KCNF1Q9H3M0 494 aa25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 POLR3EQ9NVU0 708 aa25.28■■□□□ 1.64
NHLRC4-202ENST00000540585 ECE2O60344 883 aa25.27■■□□□ 1.64
NHLRC4-202ENST00000540585 U2AF2P26368 475 aaKnown RBP eCLIP25.27■■□□□ 1.64
NHLRC4-202ENST00000540585 ME1P48163 572 aa25.27■■□□□ 1.64
NHLRC4-202ENST00000540585 SBK1Q52WX2 424 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms