RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 CLTBP09497 229 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 RAG1P15918 1043 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 HOXA7P31268 230 aaPredicted RBP10.29□□□□□ -0.76
KLHL42-203ENST00000540301 PBX2P40425 430 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 KCNQ1P51787 676 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 HERVK_113P62684 666 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 ERVK-9P63128 1117 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 ERVK-24P63145 666 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 TFF2Q03403 129 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 TLE2Q04725 743 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 METTL24Q5JXM2 366 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 C1orf53Q5VUE5 145 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 CCDC129Q6ZRS4 1044 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 PBX4Q9BYU1 374 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
KLHL42-203ENST00000540301 CWC22Q9HCG8 908 aaKnown RBP10.29□□□□□ -0.76
KLHL42-203ENST00000540301 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
KLHL42-203ENST00000540301 MYBBP1AQ9BQG0 1328 aaKnown RBP10.29□□□□□ -0.76
KLHL42-203ENST00000540301 FAM86C2PA6NEL3 165 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 GRXCR1A8MXD5 290 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 TBC1D12O60347 775 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 PDE8BO95263 885 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 PRDX5P30044 214 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 ADCYAP1R1P41586 468 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 FERMT2Q96AC1 680 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.28□□□□□ -0.76
KLHL42-203ENST00000540301 AS3MTQ9HBK9 375 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 TMOD4Q9NZQ9 345 aa10.28□□□□□ -0.76
KLHL42-203ENST00000540301 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.76
KLHL42-203ENST00000540301 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 SMIM22K7EJ46 135 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 GRM8O00222 908 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 GLRX3O76003 335 aaKnown RBP10.27□□□□□ -0.77
KLHL42-203ENST00000540301 LDHBP07195 334 aaKnown RBP10.27□□□□□ -0.77
KLHL42-203ENST00000540301 CYP2C19P33261 490 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 PICALMQ13492 652 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 TRPV1Q8NER1 839 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 PAGR1Q9BTK6 254 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
KLHL42-203ENST00000540301 IFIT1P09914 478 aaKnown RBP10.26□□□□□ -0.77
KLHL42-203ENST00000540301 CYBAP13498 195 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 CAP2P40123 477 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 BACE1P56817 501 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 MTMR2Q13614 643 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
KLHL42-203ENST00000540301 LRRC24Q50LG9 513 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 BEND3Q5T5X7 828 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 ANO1Q5XXA6 986 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 MICALL1Q8N3F8 863 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 VGLL2Q8N8G2 317 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 GTF3C2Q8WUA4 911 aaPredicted RBP10.26□□□□□ -0.77
KLHL42-203ENST00000540301 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.26□□□□□ -0.77
KLHL42-203ENST00000540301 DDX4Q9NQI0 724 aaKnown RBP10.26□□□□□ -0.77
KLHL42-203ENST00000540301 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 RFX7Q2KHR2 1363 aa10.26□□□□□ -0.77
KLHL42-203ENST00000540301 SLC15A5A6NIM6 579 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 ERC2O15083 957 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 PQBP1O60828 265 aaKnown RBP10.25□□□□□ -0.77
KLHL42-203ENST00000540301 PTPREP23469 700 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 SKIV2LQ15477 1246 aaKnown RBP10.25□□□□□ -0.77
KLHL42-203ENST00000540301 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
KLHL42-203ENST00000540301 WDR78Q5VTH9 848 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 NPLOC4Q8TAT6 608 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
KLHL42-203ENST00000540301 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.77
KLHL42-203ENST00000540301 TMEM39AQ9NV64 488 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 C9orf78Q9NZ63 289 aaPredicted RBP10.25□□□□□ -0.77
KLHL42-203ENST00000540301 MSRAQ9UJ68 235 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 MYH13Q9UKX3 1938 aa10.25□□□□□ -0.77
KLHL42-203ENST00000540301 C19orf81C9J6K1 198 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 F6X3S4 739 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 PI4K2BG5E9Z4 385 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 SEPT4O43236 478 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 HOXC6P09630 235 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 CCNA1P78396 465 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 NHLH1Q02575 133 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 RRP1BQ14684 758 aaKnown RBP10.24□□□□□ -0.77
KLHL42-203ENST00000540301 LRRC41Q15345 812 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 PUM3Q15397 648 aaKnown RBP10.24□□□□□ -0.77
KLHL42-203ENST00000540301 RAB30Q15771 203 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 HERVK_113Q902F9 699 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 WDR18Q9BV38 432 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 SLC28A3Q9HAS3 691 aa10.24□□□□□ -0.77
KLHL42-203ENST00000540301 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 PRR33A8MZF0 331 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 APAF1O14727 1248 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 TLL1O43897 1013 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 IGHA2P01877 340 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 FGFR2P21802 821 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 RALBP1Q15311 655 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 RASIP1Q5U651 963 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 CCDC174Q6PII3 467 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 SLC44A5Q8NCS7 719 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
KLHL42-203ENST00000540301 NKX2-4Q9H2Z4 354 aa10.23□□□□□ -0.77
KLHL42-203ENST00000540301 PHF24Q9UPV7 400 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms