RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CCDC84Q86UT8 332 aaPredicted RBP9.14□□□□□ -0.95
GNE-205ENST00000539815 AK9Q5TCS8 1911 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 FLOT1O75955 427 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 C15orf52Q6ZUT6 534 aaKnown RBP9.14□□□□□ -0.95
GNE-205ENST00000539815 PROCA1Q8NCQ7 364 aaPredicted RBP9.14□□□□□ -0.95
GNE-205ENST00000539815 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 TGFBRAP1Q8WUH2 860 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 CRNKL1Q9BZJ0 848 aaKnown RBP9.14□□□□□ -0.95
GNE-205ENST00000539815 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
GNE-205ENST00000539815 HOXC10Q9NYD6 342 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 IL16Q14005 1332 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 TJP1Q07157 1748 aa9.14□□□□□ -0.95
GNE-205ENST00000539815 FAM196BA6NMK8 535 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 E9PSI1 815 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 PTPRAP18433 802 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 MTMR2Q13614 643 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 ANO1Q5XXA6 986 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 FAM43BQ6ZT52 329 aaPredicted RBP9.13□□□□□ -0.95
GNE-205ENST00000539815 AP5M1Q9H0R1 490 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 ZEB2O60315 1214 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 PQBP1O60828 265 aaKnown RBP9.13□□□□□ -0.95
GNE-205ENST00000539815 HMMRO75330 724 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 IFIT2P09913 472 aaKnown RBP9.13□□□□□ -0.95
GNE-205ENST00000539815 GJA5P36382 358 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 ASCC2Q9H1I8 757 aaPredicted RBP9.13□□□□□ -0.95
GNE-205ENST00000539815 ZNF287Q9HBT7 754 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 AATFQ9NY61 560 aaKnown RBP eCLIP9.13□□□□□ -0.95
GNE-205ENST00000539815 MTMR7Q9Y216 660 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 STXBP5LQ9Y2K9 1186 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 GDF11O95390 407 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 IRF5Q13568 498 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 GSE1Q14687 1217 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 CERKLQ49MI3 558 aaPredicted RBP9.13□□□□□ -0.95
GNE-205ENST00000539815 MS4A4AQ96JQ5 239 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
GNE-205ENST00000539815 SLC3A2P08195 630 aaKnown RBP9.12□□□□□ -0.95
GNE-205ENST00000539815 HSP90AB4PQ58FF6 505 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 FBXO33Q7Z6M2 555 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 CLUAP1Q96AJ1 413 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 PAPPA2Q9BXP8 1791 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 COL5A3P25940 1745 aaPredicted RBP9.12□□□□□ -0.95
GNE-205ENST00000539815 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
GNE-205ENST00000539815 B4DLN1 442 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 MRPL12P52815 198 aaKnown RBP9.12□□□□□ -0.95
GNE-205ENST00000539815 HERVK_113P62684 666 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 ABCB5Q2M3G0 1257 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 NUP133Q8WUM0 1156 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 APBA2Q99767 749 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 MRIQ9BWK5 157 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.12□□□□□ -0.95
GNE-205ENST00000539815 DHX16O60231 1041 aaKnown RBP9.12□□□□□ -0.95
GNE-205ENST00000539815 GNAI2P04899 355 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 MS4A1P11836 297 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 SSTR3P32745 418 aaPredicted RBP9.12□□□□□ -0.95
GNE-205ENST00000539815 TIMM10P62072 90 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 NFIAQ12857 509 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 RGS22Q8NE09 1264 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 TRPM7Q96QT4 1865 aa9.12□□□□□ -0.95
GNE-205ENST00000539815 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 STARD7Q9NQZ5 370 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 PTPRCP08575 1304 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 MAP4K4O95819 1239 aaPredicted RBP9.11□□□□□ -0.95
GNE-205ENST00000539815 FCER1AP12319 257 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 CCDC85BQ15834 202 aaPredicted RBP9.11□□□□□ -0.95
GNE-205ENST00000539815 BEND3Q5T5X7 828 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 FTOQ9C0B1 505 aaKnown RBP eCLIP9.11□□□□□ -0.95
GNE-205ENST00000539815 RABGAP1Q9Y3P9 1069 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 PATL2C9JE40 543 aaKnown RBP9.11□□□□□ -0.95
GNE-205ENST00000539815 ACTN1P12814 892 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 PHKA1P46020 1223 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 RTP1P59025 263 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 CCDC102BQ68D86 513 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
GNE-205ENST00000539815 A0A1B0GUL7 405 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 ZBED4O75132 1171 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 VAMP4O75379 141 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 NBPF7P0C2Y1 421 aaPredicted RBP9.1□□□□□ -0.95
GNE-205ENST00000539815 RFX1P22670 979 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 CPXCR1Q8N123 301 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 SLC44A5Q8NCS7 719 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 MCM9Q9NXL9 1143 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 DICER1Q9UPY3 1922 aaKnown RBP9.1□□□□□ -0.95
GNE-205ENST00000539815 ITPRIPQ8IWB1 547 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 IPO9Q96P70 1041 aaKnown RBP9.1□□□□□ -0.95
GNE-205ENST00000539815 DNAJC2Q99543 621 aaKnown RBP9.1□□□□□ -0.95
GNE-205ENST00000539815 ZNF831Q5JPB2 1677 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 ADGRA2Q96PE1 1338 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 APOBEC3HQ6NTF7 200 aaKnown RBP9.1□□□□□ -0.95
GNE-205ENST00000539815 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 ANKRD35Q8N283 1001 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
GNE-205ENST00000539815 TMEM199Q8N511 208 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 ZNF609O15014 1411 aa9.1□□□□□ -0.95
GNE-205ENST00000539815 KIF16BQ96L93 1317 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 GH2P01242 217 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 C6orf222P0C671 652 aaPredicted RBP9.09□□□□□ -0.95
GNE-205ENST00000539815 BACE1P56817 501 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms