RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 SERPINB13Q9UIV8 391 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 GUCY1A2P33402 732 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 SPP2Q13103 211 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 EHD4Q9H223 541 aa12.89□□□□□ -0.35
HMGA2-209ENST00000539662 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 A0A0G2JLL6 359 aaPredicted RBP12.88□□□□□ -0.35
HMGA2-209ENST00000539662 CXCL11O14625 94 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 GH2P01242 217 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 PRRT2Q7Z6L0 340 aaPredicted RBP12.88□□□□□ -0.35
HMGA2-209ENST00000539662 TTC6Q86TZ1 520 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 STK11IPQ8N1F8 1099 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 OSBPL3Q9H4L5 887 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 ZBTB21Q9ULJ3 1066 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 MYH8P13535 1937 aa12.88□□□□□ -0.35
HMGA2-209ENST00000539662 LOC285556D6RIA3 1793 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 PDHXO00330 501 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
HMGA2-209ENST00000539662 ALDH1A1P00352 501 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
HMGA2-209ENST00000539662 CYP2C8P10632 490 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
HMGA2-209ENST00000539662 HMGCS2P54868 508 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 TAF1CQ15572 869 aaPredicted RBP12.87□□□□□ -0.35
HMGA2-209ENST00000539662 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 TRIM34Q9BYJ4 488 aa12.87□□□□□ -0.35
HMGA2-209ENST00000539662 USP17L5A8MUK1 530 aa12.86□□□□□ -0.35
HMGA2-209ENST00000539662 AKR1B1P15121 316 aa12.86□□□□□ -0.35
HMGA2-209ENST00000539662 NMIQ13287 307 aaPredicted RBP12.86□□□□□ -0.35
HMGA2-209ENST00000539662 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
HMGA2-209ENST00000539662 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
HMGA2-209ENST00000539662 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
HMGA2-209ENST00000539662 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
HMGA2-209ENST00000539662 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
HMGA2-209ENST00000539662 ADGRA2Q96PE1 1338 aa12.86□□□□□ -0.35
HMGA2-209ENST00000539662 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 PEX10O60683 326 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 ASNSP08243 561 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 CTGFP29279 349 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 CDK8P49336 464 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 MTMR2Q13614 643 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 SEPT2Q15019 361 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 RAB3GAP1Q15042 981 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 OTUD7BQ6GQQ9 843 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 CD99L2Q8TCZ2 262 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 WDR18Q9BV38 432 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 MCOLN1Q9GZU1 580 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 IL25Q9H293 177 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
HMGA2-209ENST00000539662 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 PATL2C9JE40 543 aaKnown RBP12.84□□□□□ -0.35
HMGA2-209ENST00000539662 FKTNO75072 461 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 APPP05067 770 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 SDSP20132 328 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 ZYXQ15942 572 aaKnown RBP12.84□□□□□ -0.35
HMGA2-209ENST00000539662 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
HMGA2-209ENST00000539662 HTTP42858 3142 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 MPHOSPH10O00566 681 aaKnown RBP12.83□□□□□ -0.36
HMGA2-209ENST00000539662 TLR2O60603 784 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 PRDM1O75626 825 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 CAPN15O75808 1086 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 BACE1P56817 501 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 SBK1Q52WX2 424 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.36
HMGA2-209ENST00000539662 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 TTC22Q5TAA0 569 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 POTEEQ6S8J3 1075 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 C17orf99Q6UX52 265 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
HMGA2-209ENST00000539662 AGTPBP1Q9UPW5 1226 aa12.83□□□□□ -0.36
HMGA2-209ENST00000539662 GREB1LQ9C091 1923 aaPredicted RBP12.82□□□□□ -0.36
HMGA2-209ENST00000539662 RASA1P20936 1047 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 TDO2P48775 406 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 SP3Q02447 781 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 LRRFIP1Q32MZ4 808 aaKnown RBP12.82□□□□□ -0.36
HMGA2-209ENST00000539662 GIMAP6Q6P9H5 292 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
HMGA2-209ENST00000539662 CTU1Q7Z7A3 348 aaKnown RBP12.82□□□□□ -0.36
HMGA2-209ENST00000539662 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms