RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FLT1P17948 1338 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 GOLGA8AA7E2F4 631 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 POLR3DP05423 398 aaPredicted RBP19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 CCDC93Q567U6 631 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 KIAA0825Q8IV33 1275 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 TMTC2Q8N394 836 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 SUPT20HQ8NEM7 779 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 NMT2O60551 498 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 IQCA1Q86XH1 822 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 ORC3Q9UBD5 711 aaPredicted RBP19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 KIF3AQ9Y496 699 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 NAV1Q8NEY1 1877 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 LETM1O95202 739 aaPredicted RBP19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 UBE2HP62256 183 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 GUCY1B3Q02153 619 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 AMOTL1Q8IY63 956 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 USP25Q9UHP3 1055 aa19.85■□□□□ 0.77
PCDHB17P-201ENST00000539533 USP17L3A6NCW0 530 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 USP17L4A6NCW7 530 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 POLD1P28340 1107 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 NTRK3Q16288 839 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 USP17L1Q7RTZ2 530 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 SMAP1Q8IYB5 467 aaPredicted RBP19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 RTKN2Q8IZC4 609 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 ZNF654Q8IZM8 581 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 SLC44A5Q8NCS7 719 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 PHKBQ93100 1093 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 KIF13BQ9NQT8 1826 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 ADAMTSL1Q8N6G6 1762 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 YDJCA8MPS7 323 aa19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 PPP1R1BQ9UD71 204 aaPredicted RBP19.84■□□□□ 0.77
PCDHB17P-201ENST00000539533 PICALMQ13492 652 aa19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 APOBEC3HQ6NTF7 200 aaKnown RBP19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 NUP133Q8WUM0 1156 aa19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 TEKT1Q969V4 418 aa19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 USP40Q9NVE5 1235 aa19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 PCDHAC2Q9Y5I4 1007 aa19.83■□□□□ 0.77
PCDHB17P-201ENST00000539533 TSPY2A6NKD2 308 aa19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 FIBPO43427 364 aa19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 CRKP46108 304 aa19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 IFIT1BQ5T764 474 aaKnown RBP19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 OTUD7BQ6GQQ9 843 aa19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 MKNK2Q9HBH9 465 aa19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 ZNF277Q9NRM2 450 aaPredicted RBP19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 GJB4Q9NTQ9 266 aa19.83■□□□□ 0.76
PCDHB17P-201ENST00000539533 ROBO3Q96MS0 1386 aa19.82■□□□□ 0.76
PCDHB17P-201ENST00000539533 TGFB2P61812 414 aa19.82■□□□□ 0.76
PCDHB17P-201ENST00000539533 TFAP4Q01664 338 aa19.82■□□□□ 0.76
PCDHB17P-201ENST00000539533 RESTQ13127 1097 aa19.82■□□□□ 0.76
PCDHB17P-201ENST00000539533 UPF1Q92900 1129 aaKnown RBP eCLIP19.82■□□□□ 0.76
PCDHB17P-201ENST00000539533 PIM2Q9P1W9 311 aa19.82■□□□□ 0.76
PCDHB17P-201ENST00000539533 WDHD1O75717 1129 aaPredicted RBP19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 ADCY5O95622 1261 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 FKBP1AP62942 108 aaKnown RBP19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 GRIPAP1Q4V328 841 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 CDC42EP5Q6NZY7 148 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 PSMD1Q99460 953 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 DDX4Q9NQI0 724 aaKnown RBP19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 ZNF646O15015 1829 aaPredicted RBP19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 CDKL5O76039 1030 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 RTN1Q16799 776 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 TPRNQ4KMQ1 711 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 CPLX2Q6PUV4 134 aaKnown RBP19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 CMTR1Q8N1G2 835 aaKnown RBP19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 FANCBQ8NB91 859 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 PIBF1Q8WXW3 757 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 AIFM3Q96NN9 605 aa19.81■□□□□ 0.76
PCDHB17P-201ENST00000539533 PSDA5PKW4 1024 aaPredicted RBP19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 UBE2Q2LH0YL09 131 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 ZNF830Q96NB3 372 aaPredicted RBP19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 NID2Q14112 1375 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 DDX60LQ5H9U9 1706 aaKnown RBP19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 IARSP41252 1262 aaKnown RBP19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 CCDC82Q8N4S0 544 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 C8orf76Q96K31 380 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 IL17RBQ9NRM6 502 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 MYH1P12882 1939 aa19.8■□□□□ 0.76
PCDHB17P-201ENST00000539533 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 LARGE2Q8N3Y3 721 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 ZDHHC15Q96MV8 337 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 TFIP11Q9UBB9 837 aaKnown RBP19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 CDK8P49336 464 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 RBM5P52756 815 aaKnown RBP eCLIP19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 DNTTIP2Q5QJE6 756 aaKnown RBP19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 RCSD1Q6JBY9 416 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 ZNF444Q8N0Y2 327 aaPredicted RBP19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 FBXO18Q8NFZ0 1043 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 ZSCAN16Q9H4T2 348 aaPredicted RBP19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 FOCADQ5VW36 1801 aa19.79■□□□□ 0.76
PCDHB17P-201ENST00000539533 IFNAR1P17181 557 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 RASA1P20936 1047 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 RCAN1P53805 252 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 KRT85P78386 507 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 TROAPQ12815 778 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 C16orf86Q6ZW13 317 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 CATIPQ7Z7H3 387 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 MRIQ9BWK5 157 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms