RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 FARP2O94887 1054 aaPredicted RBP8.76□□□□□ -1.01
VBP1-203ENST00000535916 GRK4P32298 578 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 PRAMEF13Q5VWM6 474 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 ZSWIM9Q86XI8 627 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 MFSD2AQ8NA29 543 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 CARS2Q9HA77 564 aaKnown RBP8.76□□□□□ -1.01
VBP1-203ENST00000535916 ATP13A1Q9HD20 1204 aa8.76□□□□□ -1.01
VBP1-203ENST00000535916 H3BS24 57 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 ZNF865P0CJ78 1059 aaPredicted RBP8.75□□□□□ -1.01
VBP1-203ENST00000535916 RPS26P62854 115 aaKnown RBP8.75□□□□□ -1.01
VBP1-203ENST00000535916 MAP3K11Q16584 847 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 LETMD1Q6P1Q0 360 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 C22orf34Q6ZV56 151 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 XAGE3Q8WTP9 111 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 DUSP9Q99956 384 aaKnown RBP8.75□□□□□ -1.01
VBP1-203ENST00000535916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.75□□□□□ -1.01
VBP1-203ENST00000535916 AK5Q9Y6K8 562 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 CAPN6Q9Y6Q1 641 aa8.75□□□□□ -1.01
VBP1-203ENST00000535916 LMNB1P20700 586 aa8.74□□□□□ -1.01
VBP1-203ENST00000535916 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
VBP1-203ENST00000535916 ZNF503-AS2A6NEH8 195 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 GFRA2O00451 464 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 CST3P01034 146 aaPredicted RBP8.73□□□□□ -1.01
VBP1-203ENST00000535916 LIG3P49916 1009 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 KCNMB1Q16558 191 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 FYB2Q5VWT5 728 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 ST14Q9Y5Y6 855 aa8.73□□□□□ -1.01
VBP1-203ENST00000535916 CBX7O95931 251 aa8.72□□□□□ -1.01
VBP1-203ENST00000535916 MEI1Q5TIA1 1274 aa8.72□□□□□ -1.01
VBP1-203ENST00000535916 DPH2Q9BQC3 489 aaPredicted RBP8.72□□□□□ -1.01
VBP1-203ENST00000535916 ANKRD33BA6NCL7 494 aa8.71□□□□□ -1.02
VBP1-203ENST00000535916 LRRC10BA6NIK2 292 aa8.71□□□□□ -1.02
VBP1-203ENST00000535916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.71□□□□□ -1.02
VBP1-203ENST00000535916 MESP2Q0VG99 397 aa8.71□□□□□ -1.02
VBP1-203ENST00000535916 EAPPQ56P03 285 aaPredicted RBP8.71□□□□□ -1.02
VBP1-203ENST00000535916 KSR1Q8IVT5 923 aa8.71□□□□□ -1.02
VBP1-203ENST00000535916 TJP2Q9UDY2 1190 aa8.71□□□□□ -1.02
VBP1-203ENST00000535916 PATL2C9JE40 543 aaKnown RBP8.7□□□□□ -1.02
VBP1-203ENST00000535916 AFMP43652 599 aa8.7□□□□□ -1.02
VBP1-203ENST00000535916 MLANAQ16655 118 aa8.7□□□□□ -1.02
VBP1-203ENST00000535916 LCE4AQ5TA78 99 aa8.7□□□□□ -1.02
VBP1-203ENST00000535916 ZNF746Q6NUN9 644 aaPredicted RBP8.7□□□□□ -1.02
VBP1-203ENST00000535916 CDH24Q86UP0 819 aa8.7□□□□□ -1.02
VBP1-203ENST00000535916 NPAS4Q8IUM7 802 aa8.7□□□□□ -1.02
VBP1-203ENST00000535916 LIN37Q96GY3 246 aaPredicted RBP8.7□□□□□ -1.02
VBP1-203ENST00000535916 C19orf73Q9NVV2 129 aa8.7□□□□□ -1.02
VBP1-203ENST00000535916 PGRP06401 933 aa8.69□□□□□ -1.02
VBP1-203ENST00000535916 TFE3P19532 575 aaPredicted RBP8.69□□□□□ -1.02
VBP1-203ENST00000535916 PKN1Q16512 942 aa8.69□□□□□ -1.02
VBP1-203ENST00000535916 MIR1-1HGQ9H1L0 117 aa8.69□□□□□ -1.02
VBP1-203ENST00000535916 TACC3Q9Y6A5 838 aa8.69□□□□□ -1.02
VBP1-203ENST00000535916 DBX1A6NMT0 343 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 TNK2Q07912 1038 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 THAP5Q7Z6K1 395 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
VBP1-203ENST00000535916 UBE2FQ969M7 185 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 TMEM87BQ96K49 555 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 SLC38A3Q99624 504 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 FAM53CQ9NYF3 392 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 TLR6Q9Y2C9 796 aa8.68□□□□□ -1.02
VBP1-203ENST00000535916 SND1Q7KZF4 910 aaKnown RBP eCLIP8.67□□□□□ -1.02
VBP1-203ENST00000535916 KIRREL1Q96J84 757 aa8.67□□□□□ -1.02
VBP1-203ENST00000535916 FAM84AQ96KN4 292 aa8.67□□□□□ -1.02
VBP1-203ENST00000535916 ZSWIM5Q9P217 1185 aa8.67□□□□□ -1.02
VBP1-203ENST00000535916 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
VBP1-203ENST00000535916 GLI1P08151 1106 aa8.66□□□□□ -1.02
VBP1-203ENST00000535916 CYP7A1P22680 504 aa8.66□□□□□ -1.02
VBP1-203ENST00000535916 GDNFP39905 211 aa8.66□□□□□ -1.02
VBP1-203ENST00000535916 KIR3DL1P43629 444 aa8.66□□□□□ -1.02
VBP1-203ENST00000535916 TSNAXIP1Q2TAA8 658 aa8.66□□□□□ -1.02
VBP1-203ENST00000535916 JARID2Q92833 1246 aaPredicted RBP8.66□□□□□ -1.02
VBP1-203ENST00000535916 SLC6A19Q695T7 634 aa8.65□□□□□ -1.02
VBP1-203ENST00000535916 ACSF2Q96CM8 615 aaPredicted RBP8.65□□□□□ -1.02
VBP1-203ENST00000535916 COX4I2Q96KJ9 171 aa8.65□□□□□ -1.02
VBP1-203ENST00000535916 ALPK1Q96QP1 1244 aa8.65□□□□□ -1.02
VBP1-203ENST00000535916 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
VBP1-203ENST00000535916 PDE4BQ07343 736 aa8.64□□□□□ -1.03
VBP1-203ENST00000535916 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
VBP1-203ENST00000535916 PRR23BQ6ZRT6 265 aa8.64□□□□□ -1.03
VBP1-203ENST00000535916 DNAJB8Q8NHS0 232 aa8.64□□□□□ -1.03
VBP1-203ENST00000535916 SLAMF8Q9P0V8 285 aa8.64□□□□□ -1.03
VBP1-203ENST00000535916 WASH4PA8MWX3 477 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 CTSHP09668 335 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 ETV3P41162 512 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 DAB2P98082 770 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 PSMD2Q13200 908 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 MPZL3Q6UWV2 235 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 MCATQ8IVS2 390 aaKnown RBP8.63□□□□□ -1.03
VBP1-203ENST00000535916 PHC3Q8NDX5 983 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 Q96M66 194 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 NOC4LQ9BVI4 516 aaKnown RBP8.63□□□□□ -1.03
VBP1-203ENST00000535916 CORINQ9Y5Q5 1042 aa8.63□□□□□ -1.03
VBP1-203ENST00000535916 ESR1P03372 595 aa8.62□□□□□ -1.03
VBP1-203ENST00000535916 RLBP1P12271 317 aa8.62□□□□□ -1.03
VBP1-203ENST00000535916 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
VBP1-203ENST00000535916 PIWIL2Q8TC59 973 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms